Task 84714396

Name ebola_GP_v1_sidock_00435041_r2_s-20.0_0
Workunit 55945431
Created 4 Oct 2024, 1:25:19 UTC
Sent 4 Oct 2024, 14:34:28 UTC
Report deadline 6 Oct 2024, 14:34:28 UTC
Received 5 Oct 2024, 10:47:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 23605
Run time 1 hours 53 min 17 sec
CPU time 1 hours 52 min 21 sec
Validate state Valid
Credit 55.86
Device peak FLOPS 5.97 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 97.86 MB
Peak swap size 105.07 MB
Peak disk usage 16.94 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:17:17 (11060): wrapper (7.17.26016): starting
17:17:17 (11060): wrapper (7.17.26016): starting
17:17:17 (11060): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57d67bc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x76f020845320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x76f0208add45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57d67bc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57d67bc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x76f020845320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76f0208ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76f0208f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76f02092972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57d67bc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57d67bc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76f02082a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76f02082a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57d67bc1aa3a]

Exiting...
10:18:05 (2853): wrapper (7.17.26016): starting
10:18:06 (2853): wrapper (7.17.26016): starting
10:18:06 (2853): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:58:10 (2853): cmdock exited; CPU time 3459.506907
11:58:10 (2853): called boinc_finish(0)

</stderr_txt>
]]>


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