Task 84674275

Name ebola_GP_v1_sidock_00425037_r3_s-20.0_0
Workunit 55905416
Created 4 Oct 2024, 0:48:39 UTC
Sent 4 Oct 2024, 5:22:28 UTC
Report deadline 6 Oct 2024, 5:22:28 UTC
Received 6 Oct 2024, 13:01:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 58459
Run time 1 hours 59 min 48 sec
CPU time 1 hours 57 min 55 sec
Validate state Valid
Credit 76.40
Device peak FLOPS 4.59 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 98.11 MB
Peak swap size 219.87 MB
Peak disk usage 16.80 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:16 (4042): wrapper (7.17.26016): starting
02:53:16 (4042): wrapper (7.17.26016): starting
02:53:16 (4042): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5561ed23ff8c]
/lib64/libc.so.6(+0x3e6f0)[0x7fc641c3e6f0]
/lib64/libc.so.6(free+0x1e)[0x7fc641c99cfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5561ed25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5561ed27b8e4]
/lib64/libc.so.6(+0x3e6f0)[0x7fc641c3e6f0]
/lib64/libc.so.6(clock_nanosleep+0x65)[0x7fc641cd4075]
/lib64/libc.so.6(__nanosleep+0x17)[0x7fc641cd8c87]
/lib64/libc.so.6(usleep+0x49)[0x7fc641d04b29]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5561ed251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd)[0x5561ed23cdcd]
/lib64/libc.so.6(+0x89c02)[0x7fc641c89c02]
/lib64/libc.so.6(+0x10ec40)[0x7fc641d0ec40]

Exiting...
08:42:36 (2068): wrapper (7.17.26016): starting
08:42:37 (2068): wrapper (7.17.26016): starting
08:42:37 (2068): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:01:37 (2068): cmdock exited; CPU time 1130.589810
09:01:37 (2068): called boinc_finish(0)

</stderr_txt>
]]>


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