Task 84655826

Name	ebola_GP_v1_sidock_00420435_r4_s-20.0_0
Workunit	55887009
Created	4 Oct 2024, 0:31:40 UTC
Sent	4 Oct 2024, 1:03:10 UTC
Report deadline	6 Oct 2024, 1:03:10 UTC
Received	5 Oct 2024, 11:13:24 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61369
Run time	1 hours 34 min 50 sec
CPU time	1 hours 34 min 50 sec
Validate state	Valid
Credit	31.61
Device peak FLOPS	2.59 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	96.92 MB
Peak swap size	103.63 MB
Peak disk usage	16.65 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:51 (32549): wrapper (7.17.26016): starting
06:51:52 (32549): wrapper (7.17.26016): starting
06:51:52 (32549): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:05:08 (38792): wrapper (7.17.26016): starting
10:05:08 (38792): wrapper (7.17.26016): starting
10:05:08 (38792): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59b67003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x724351e45320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x724351e9eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x724351e4526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x724351e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x724351e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x724351ea8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x724351eab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x724351eadd9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59b67005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59b67007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x724351e45320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x724351eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x724351ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x724351f2972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59b670051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59b67001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x724351e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x724351e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59b67001aa3a]

Exiting...
05:08:00 (2132): wrapper (7.17.26016): starting
05:08:00 (2132): wrapper (7.17.26016): starting
05:08:00 (2132): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:13:10 (2132): cmdock exited; CPU time 1926.417477
07:13:10 (2132): called boinc_finish(0)

</stderr_txt>
]]>