Task 84219400

Name	ebola_GP_v1_sidock_00271346_r4_s-20.0_1
Workunit	55270653
Created	29 Sep 2024, 1:15:23 UTC
Sent	29 Sep 2024, 8:42:07 UTC
Report deadline	1 Oct 2024, 8:42:07 UTC
Received	29 Sep 2024, 12:16:00 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	60491
Run time	2 hours 53 min 9 sec
CPU time	2 hours 52 min 24 sec
Validate state	Valid
Credit	90.32
Device peak FLOPS	0.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks Anonymous platform (CPU)
Peak working set size	96.68 MB
Peak swap size	99.31 MB
Peak disk usage	5.11 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:42:12 (126416): wrapper (7.21.26018): starting
04:42:12 (126416): wrapper (7.21.26018): starting
04:42:12 (126416): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x328d5)[0x55975a7178d5]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7fad029bf2a0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x6d3fd)[0x55975a7523fd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x69461)[0x55975a74e461]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7fad029bf2a0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7fad02a55595]
/usr/lib64/libc.so.6(nanosleep+0x17)[0x7fad02a605b7]
/usr/lib64/libc.so.6(usleep+0x49)[0x7fad02a893d9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x409af)[0x55975a7259af]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xf1ea)[0x55975a6f41ea]
/usr/lib64/libc.so.6(+0x260d0)[0x7fad029a90d0]
/usr/lib64/libc.so.6(__libc_start_main+0x89)[0x7fad029a9189]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xb165)[0x55975a6f0165]

Exiting...
05:11:21 (145370): wrapper (7.21.26018): starting
05:11:21 (145370): wrapper (7.21.26018): starting
05:11:21 (145370): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x328d5)[0x56229ded58d5]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f617a1cf2a0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x6d3fd)[0x56229df103fd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x69461)[0x56229df0c461]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f617a1cf2a0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f617a265595]
/usr/lib64/libc.so.6(nanosleep+0x17)[0x7f617a2705b7]
/usr/lib64/libc.so.6(sleep+0x3e)[0x7f617a28144e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x40952)[0x56229dee3952]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xf1ea)[0x56229deb21ea]
/usr/lib64/libc.so.6(+0x260d0)[0x7f617a1b90d0]
/usr/lib64/libc.so.6(__libc_start_main+0x89)[0x7f617a1b9189]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xb165)[0x56229deae165]

Exiting...
05:14:54 (145512): wrapper (7.21.26018): starting
05:14:54 (145512): wrapper (7.21.26018): starting
05:14:54 (145512): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:04:35 (145512): cmdock exited; CPU time 10142.045042
08:04:35 (145512): called boinc_finish(0)

</stderr_txt>
]]>