Task 84215877

Name	ebola_GP_v1_sidock_00319608_r4_s-20.0_0
Workunit	55463701
Created	28 Sep 2024, 11:22:58 UTC
Sent	29 Sep 2024, 7:46:11 UTC
Report deadline	1 Oct 2024, 7:46:11 UTC
Received	29 Sep 2024, 12:04:11 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	60491
Run time	2 hours 59 min 50 sec
CPU time	2 hours 59 min 2 sec
Validate state	Valid
Credit	93.17
Device peak FLOPS	0.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks Anonymous platform (CPU)
Peak working set size	96.49 MB
Peak swap size	99.74 MB
Peak disk usage	5.23 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:15:16 (126091): wrapper (7.21.26018): starting
04:15:16 (126091): wrapper (7.21.26018): starting
04:15:16 (126091): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x328d5)[0x55712e51f8d5]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f52dad7f2a0]
/usr/lib64/libc.so.6(__libc_free+0x1e)[0x7f52dadddafe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x4a7be)[0x55712e5377be]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x69480)[0x55712e556480]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f52dad7f2a0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f52dae15595]
/usr/lib64/libc.so.6(nanosleep+0x17)[0x7f52dae205b7]
/usr/lib64/libc.so.6(usleep+0x49)[0x7f52dae493d9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x409af)[0x55712e52d9af]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xf1ea)[0x55712e4fc1ea]
/usr/lib64/libc.so.6(+0x260d0)[0x7f52dad690d0]
/usr/lib64/libc.so.6(__libc_start_main+0x89)[0x7f52dad69189]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xb165)[0x55712e4f8165]

Exiting...
05:11:21 (145369): wrapper (7.21.26018): starting
05:11:21 (145369): wrapper (7.21.26018): starting
05:11:21 (145369): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x328d5)[0x55a12e61b8d5]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f2c7a9572a0]
/usr/lib64/libc.so.6(__libc_free+0x1e)[0x7f2c7a9b5afe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x4a7be)[0x55a12e6337be]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x69480)[0x55a12e652480]
/usr/lib64/libc.so.6(+0x3c2a0)[0x7f2c7a9572a0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f2c7a9ed595]
/usr/lib64/libc.so.6(nanosleep+0x17)[0x7f2c7a9f85b7]
/usr/lib64/libc.so.6(usleep+0x49)[0x7f2c7aa213d9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0x409af)[0x55a12e6299af]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xf1ea)[0x55a12e5f81ea]
/usr/lib64/libc.so.6(+0x260d0)[0x7f2c7a9410d0]
/usr/lib64/libc.so.6(__libc_start_main+0x89)[0x7f2c7a941189]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper(+0xb165)[0x55a12e5f4165]

Exiting...
05:14:54 (145511): wrapper (7.21.26018): starting
05:14:54 (145511): wrapper (7.21.26018): starting
05:14:54 (145511): wrapper: running ../../projects/www.sidock.si_sidock/cmdock (-c -j 1 -b 1 -r target.prm -p "/opt/cmdock-0.2.0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:43:23 (145511): cmdock exited; CPU time 8875.470232
07:43:23 (145511): called boinc_finish(0)

</stderr_txt>
]]>