Task 83859775

Name ebola_GP_v1_sidock_00237873_r4_s-20.0_0
Workunit 55116761
Created 24 Sep 2024, 11:47:49 UTC
Sent 25 Sep 2024, 7:19:10 UTC
Report deadline 27 Sep 2024, 7:19:10 UTC
Received 26 Sep 2024, 7:51:56 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 43040
Run time 2 hours 54 min 30 sec
CPU time 2 hours 52 min 52 sec
Validate state Valid
Credit 121.18
Device peak FLOPS 7.04 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 98.05 MB
Peak swap size 104.38 MB
Peak disk usage 16.88 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
14:48:20 (84131): wrapper (7.17.26016): starting
14:48:20 (84131): wrapper (7.17.26016): starting
14:48:20 (84131): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x610bd183ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x797512a42520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x797512aa53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x610bd185c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x610bd187b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x797512a42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x797512ae57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x797512aea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x797512b1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x610bd1851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x610bd181e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x797512a29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x797512a29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x610bd181aa3a]

Exiting...
10:16:16 (11224): wrapper (7.17.26016): starting
10:16:16 (11224): wrapper (7.17.26016): starting
10:16:16 (11224): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:51:47 (11224): cmdock exited; CPU time 2129.229201
10:51:47 (11224): called boinc_finish(0)

</stderr_txt>
]]>


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