Task 83859743

Name ebola_GP_v1_sidock_00237858_r3_s-20.0_0
Workunit 55116700
Created 24 Sep 2024, 11:47:48 UTC
Sent 25 Sep 2024, 7:19:11 UTC
Report deadline 27 Sep 2024, 7:19:11 UTC
Received 26 Sep 2024, 8:07:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 43040
Run time 2 hours 34 min 12 sec
CPU time 2 hours 32 min 26 sec
Validate state Valid
Credit 105.19
Device peak FLOPS 7.04 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 97.92 MB
Peak swap size 104.19 MB
Peak disk usage 16.79 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
14:49:06 (84390): wrapper (7.17.26016): starting
14:49:06 (84390): wrapper (7.17.26016): starting
14:49:06 (84390): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b4f72a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7d4a44a42520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7d4a44aa53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b4f72a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b4f72a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7d4a44a42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7d4a44ae57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7d4a44aea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7d4a44b1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b4f72a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b4f72a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7d4a44a29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7d4a44a29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b4f72a1aa3a]

Exiting...
10:51:49 (24675): wrapper (7.17.26016): starting
10:51:49 (24675): wrapper (7.17.26016): starting
10:51:49 (24675): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:07:47 (24675): cmdock exited; CPU time 957.263014
11:07:47 (24675): called boinc_finish(0)

</stderr_txt>
]]>


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