Task 83824118

Name	ebola_GP_v1_sidock_00228971_r2_s-20.0_0
Workunit	55081151
Created	24 Sep 2024, 11:08:43 UTC
Sent	24 Sep 2024, 19:36:05 UTC
Report deadline	26 Sep 2024, 19:36:05 UTC
Received	27 Sep 2024, 18:51:51 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	29913
Run time	4 hours 2 min 23 sec
CPU time	3 hours 57 min 55 sec
Validate state	Valid
Credit	161.86
Device peak FLOPS	6.12 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.78 MB
Peak swap size	104.50 MB
Peak disk usage	16.86 MB
Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:17 (168915): wrapper (7.17.26016): starting
20:35:17 (168915): wrapper (7.17.26016): starting
20:35:17 (168915): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5ab02b83ff8c]
/usr/lib/libc.so.6(+0x3d1d0) [0x7c36bbf1e1d0]
/usr/lib/libc.so.6(__libc_free+0x25) [0x7c36bbf86575]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5ab02b85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5ab02b87b8e4]
/usr/lib/libc.so.6(+0x3d1d0) [0x7c36bbf1e1d0]
/usr/lib/libc.so.6(clock_nanosleep+0x63) [0x7c36bbfc2733]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7c36bbfce827]
/usr/lib/libc.so.6(usleep+0x4a) [0x7c36bbff9f9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5ab02b851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5ab02b81e784]
/usr/lib/libc.so.6(+0x25e08) [0x7c36bbf06e08]
/usr/lib/libc.so.6(__libc_start_main+0x8c) [0x7c36bbf06ecc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5ab02b81aa3a]

Exiting...
04:04:55 (6626): wrapper (7.17.26016): starting
04:04:55 (6626): wrapper (7.17.26016): starting
04:04:55 (6626): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x608c4a63ff8c]
/usr/lib/libc.so.6(+0x3d1d0) [0x734d6635c1d0]
/usr/lib/libc.so.6(__libc_free+0x25) [0x734d663c4575]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x608c4a65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x608c4a67b8e4]
/usr/lib/libc.so.6(+0x3d1d0) [0x734d6635c1d0]
/usr/lib/libc.so.6(clock_nanosleep+0x63) [0x734d66400733]
/usr/lib/libc.so.6(nanosleep+0x17) [0x734d6640c827]
/usr/lib/libc.so.6(usleep+0x4a) [0x734d66437f9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x608c4a651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x608c4a61e784]
/usr/lib/libc.so.6(+0x25e08) [0x734d66344e08]
/usr/lib/libc.so.6(__libc_start_main+0x8c) [0x734d66344ecc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x608c4a61aa3a]

Exiting...
16:51:10 (7735): wrapper (7.17.26016): starting
16:51:10 (7735): wrapper (7.17.26016): starting
16:51:10 (7735): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55c2d943ff8c]
/usr/lib/libc.so.6(+0x3d1d0) [0x743b1499d1d0]
/usr/lib/libc.so.6(__libc_free+0x25) [0x743b14a05575]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55c2d945c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55c2d947b8e4]
/usr/lib/libc.so.6(+0x3d1d0) [0x743b1499d1d0]
/usr/lib/libc.so.6(clock_nanosleep+0x63) [0x743b14a41733]
/usr/lib/libc.so.6(nanosleep+0x17) [0x743b14a4d827]
/usr/lib/libc.so.6(usleep+0x4a) [0x743b14a78f9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55c2d9451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55c2d941e784]
/usr/lib/libc.so.6(+0x25e08) [0x743b14985e08]
/usr/lib/libc.so.6(__libc_start_main+0x8c) [0x743b14985ecc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55c2d941aa3a]

Exiting...
04:09:01 (7550): wrapper (7.17.26016): starting
04:09:01 (7550): wrapper (7.17.26016): starting
04:09:01 (7550): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x579f40c3ff8c]
/usr/lib/libc.so.6(+0x3d1d0) [0x775212af41d0]
/usr/lib/libc.so.6(__libc_free+0x25) [0x775212b5c575]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x579f40c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x579f40c7b8e4]
/usr/lib/libc.so.6(+0x3d1d0) [0x775212af41d0]
/usr/lib/libc.so.6(clock_nanosleep+0x63) [0x775212b98733]
/usr/lib/libc.so.6(nanosleep+0x17) [0x775212ba4827]
/usr/lib/libc.so.6(usleep+0x4a) [0x775212bcff9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x579f40c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x579f40c1e784]
/usr/lib/libc.so.6(+0x25e08) [0x775212adce08]
/usr/lib/libc.so.6(__libc_start_main+0x8c) [0x775212adcecc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x579f40c1aa3a]

Exiting...
19:39:35 (7587): wrapper (7.17.26016): starting
19:39:35 (7587): wrapper (7.17.26016): starting
19:39:35 (7587): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:51:36 (7587): cmdock exited; CPU time 3937.859621
20:51:36 (7587): called boinc_finish(0)

</stderr_txt>
]]>