Task 83382424

Name	ebola_GP_v1_sidock_00121120_r4_s-20.0_0
Workunit	54649749
Created	19 Sep 2024, 4:34:18 UTC
Sent	19 Sep 2024, 6:06:18 UTC
Report deadline	21 Sep 2024, 6:06:18 UTC
Received	20 Sep 2024, 3:11:25 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	2 hours 18 min 24 sec
CPU time	2 hours 18 min 15 sec
Validate state	Valid
Credit	115.45
Device peak FLOPS	8.25 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.11 MB
Peak swap size	103.35 MB
Peak disk usage	16.83 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:55:40 (100120): wrapper (7.17.26016): starting
04:55:40 (100120): wrapper (7.17.26016): starting
04:55:40 (100120): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57ce2f23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x74d22d442520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x74d22d4969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x74d22d442476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x74d22d4287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x74d22d489676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x74d22d4a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x74d22d4a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x74d22d4a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57ce2f25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57ce2f27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x74d22d442520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x74d22d4e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x74d22d4ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x74d22d51bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57ce2f251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57ce2f21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x74d22d429d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x74d22d429e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57ce2f21aa3a]

Exiting...
16:31:42 (1490): wrapper (7.17.26016): starting
16:31:42 (1490): wrapper (7.17.26016): starting
16:31:42 (1490): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:34:46 (2183): wrapper (7.17.26016): starting
16:34:46 (2183): wrapper (7.17.26016): starting
16:34:46 (2183): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x606af6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f9ac7642520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f9ac76969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f9ac7642476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f9ac76287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f9ac7689676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f9ac76a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f9ac76a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f9ac76a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x606af6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x606af6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f9ac7642520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f9ac76e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f9ac76ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f9ac771bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x606af6c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x606af6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f9ac7629d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f9ac7629e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x606af6c1aa3a]

Exiting...
20:03:02 (19350): wrapper (7.17.26016): starting
20:03:02 (19350): wrapper (7.17.26016): starting
20:03:02 (19350): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:17:08 (19350): cmdock exited; CPU time 4415.070422
21:17:08 (19350): called boinc_finish(0)

</stderr_txt>
]]>