Task 83377362

Name	corona_RdRp_v2_sidock_01936458_r1_s-20_2
Workunit	54068578
Created	18 Sep 2024, 23:15:14 UTC
Sent	19 Sep 2024, 4:36:09 UTC
Report deadline	27 Sep 2024, 4:36:09 UTC
Received	20 Sep 2024, 18:48:46 UTC
Server state	Over
Outcome	Validate error
Client state	Done
Exit status	0 (0x00000000)
Computer ID	60430
Run time	9 hours 38 min
CPU time	9 hours 37 min 48 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	192.83 MB
Peak swap size	200.17 MB
Peak disk usage	20.36 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:30:45 (32440): wrapper (7.17.26016): starting
01:30:45 (32440): wrapper (7.17.26016): starting
01:30:45 (32440): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x609ca943ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7cc9b6242520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7cc9b62969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7cc9b6242476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7cc9b62287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7cc9b6289676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7cc9b62a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7cc9b62a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7cc9b62a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x609ca945c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x609ca947b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7cc9b6242520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7cc9b62e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7cc9b62ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7cc9b631bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x609ca9451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x609ca941e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7cc9b6229d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7cc9b6229e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x609ca941aa3a]

Exiting...
20:12:10 (3808): wrapper (7.17.26016): starting
20:12:10 (3808): wrapper (7.17.26016): starting
20:12:10 (3808): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b930b63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x72a012c42520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x72a012c969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x72a012c42476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x72a012c287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x72a012c89676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x72a012ca0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x72a012ca2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x72a012ca5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b930b65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b930b67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x72a012c42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x72a012ce57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x72a012cea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x72a012d1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b930b651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b930b61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x72a012c29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x72a012c29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b930b61aa3a]

Exiting...
13:24:34 (2651): wrapper (7.17.26016): starting
13:24:34 (2651): wrapper (7.17.26016): starting
13:24:34 (2651): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x590e14e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7a41cda45320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7a41cda9eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7a41cda4526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7a41cda288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7a41cda297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7a41cdaa8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7a41cdaab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7a41cdaadd9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x590e14e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x590e14e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7a41cda45320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7a41cdaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7a41cdaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7a41cdb2972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x590e14e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x590e14e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7a41cda2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7a41cda2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x590e14e1aa3a]

Exiting...
13:48:29 (5336): wrapper (7.17.26016): starting
13:48:29 (5336): wrapper (7.17.26016): starting
13:48:29 (5336): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:48:31 (5336): cmdock exited; CPU time 1.881312
13:48:31 (5336): called boinc_finish(0)

</stderr_txt>
]]>