Name | corona_RdRp_v2_sidock_01924622_r2_s-20_2 |
Workunit | 54044907 |
Created | 16 Sep 2024, 22:52:52 UTC |
Sent | 17 Sep 2024, 14:00:12 UTC |
Report deadline | 25 Sep 2024, 14:00:12 UTC |
Received | 26 Sep 2024, 7:56:52 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 43040 |
Run time | 1 days 8 hours 42 min 25 sec |
CPU time | 1 days 8 hours 38 min |
Validate state | Task was reported too late to validate |
Credit | 0.00 |
Device peak FLOPS | 7.04 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 193.52 MB |
Peak swap size | 200.95 MB |
Peak disk usage | 20.93 MB |
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 10:41:49 (9230): wrapper (7.17.26016): starting 10:41:49 (9230): wrapper (7.17.26016): starting 10:41:49 (9230): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d094b83ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x770fcf842520] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x770fcf8969fc] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x770fcf842476] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x770fcf8287f3] /lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x770fcf889676] /lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x770fcf8a0cfc] /lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x770fcf8a2a44] /lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x770fcf8a5453] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d094b85c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d094b87b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x770fcf842520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x770fcf8e57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x770fcf8ea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x770fcf91bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d094b851adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d094b81e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x770fcf829d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x770fcf829e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d094b81aa3a] Exiting... 13:33:14 (2620): wrapper (7.17.26016): starting 13:33:14 (2620): wrapper (7.17.26016): starting 13:33:14 (2620): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a4523e3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7868d7a42520] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7868d7a969fc] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7868d7a42476] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7868d7a287f3] /lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7868d7a89676] /lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7868d7aa0cfc] /lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7868d7aa2a44] /lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7868d7aa5453] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a4523e5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a4523e7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7868d7a42520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7868d7ae57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7868d7aea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7868d7b1bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a4523e51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a4523e1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7868d7a29d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7868d7a29e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a4523e1aa3a] Exiting... 10:20:11 (2618): wrapper (7.17.26016): starting 10:20:11 (2618): wrapper (7.17.26016): starting 10:20:11 (2618): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60356423ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7419d9c42520] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7419d9c969fc] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7419d9c42476] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7419d9c287f3] /lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7419d9c89676] /lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7419d9ca0cfc] /lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7419d9ca2a44] /lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7419d9ca5453] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60356425c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60356427b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7419d9c42520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7419d9ce57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7419d9cea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7419d9d1bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x603564251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60356421e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7419d9c29d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7419d9c29e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60356421aa3a] Exiting... 12:35:11 (58040): wrapper (7.17.26016): starting 12:35:11 (58040): wrapper (7.17.26016): starting 12:35:11 (58040): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x599a25c3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x742a58642520] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x742a586969fc] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x742a58642476] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x742a586287f3] /lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x742a58689676] /lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x742a586a0cfc] /lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x742a586a2a44] /lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x742a586a5453] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x599a25c5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x599a25c7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x742a58642520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x742a586e57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x742a586ea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x742a5871bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x599a25c51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x599a25c1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x742a58629d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x742a58629e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x599a25c1aa3a] Exiting... 10:02:46 (2636): wrapper (7.17.26016): starting 10:02:47 (2636): wrapper (7.17.26016): starting 10:02:47 (2636): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 10:56:40 (2636): cmdock exited; CPU time 3232.418331 10:56:40 (2636): called boinc_finish(0) </stderr_txt> ]]>
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