Name | corona_RdRp_v2_sidock_01962094_r2_s-20_0 |
Workunit | 54139851 |
Created | 9 Sep 2024, 5:44:02 UTC |
Sent | 10 Sep 2024, 1:15:50 UTC |
Report deadline | 18 Sep 2024, 1:15:50 UTC |
Received | 13 Sep 2024, 1:06:36 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 60274 |
Run time | 11 hours 52 min 39 sec |
CPU time | 11 hours 52 min 22 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 1.00 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 192.88 MB |
Peak swap size | 200.48 MB |
Peak disk usage | 20.43 MB |
<core_client_version>8.0.4</core_client_version> <![CDATA[ <stderr_txt> 06:15:17 (138174): wrapper (7.17.26016): starting 06:15:17 (138174): wrapper (7.17.26016): starting 06:15:17 (138174): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a074e43ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7a7080a45320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7a7080a9eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7a7080a4526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7a7080a288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7a7080a297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7a7080aa8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7a7080aab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7a7080aadd9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a074e45c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a074e47b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7a7080a45320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7a7080aecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7a7080af9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7a7080b2972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a074e451adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a074e41e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7a7080a2a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7a7080a2a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a074e41aa3a] Exiting... 00:30:06 (94882): wrapper (7.17.26016): starting 00:30:06 (94882): wrapper (7.17.26016): starting 00:30:06 (94882): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x63f223e3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x71275f845320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x71275f89eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x71275f84526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x71275f8288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x71275f8297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x71275f8a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x71275f8ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x71275f8add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x63f223e5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x63f223e7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x71275f845320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71275f8ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71275f8f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71275f92972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x63f223e51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x63f223e1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71275f82a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71275f82a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x63f223e1aa3a] Exiting... 21:18:17 (222742): wrapper (7.17.26016): starting 21:18:17 (222742): wrapper (7.17.26016): starting 21:18:17 (222742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6180da63ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x73b6cea45320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73b6cea9eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73b6cea4526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73b6cea288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73b6cea297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x73b6ceaa8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x73b6ceaab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73b6ceaadd9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6180da65c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6180da67b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x73b6cea45320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73b6ceaecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73b6ceaf9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73b6ceb2972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6180da651adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6180da61e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73b6cea2a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73b6cea2a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6180da61aa3a] Exiting... 09:24:48 (1897): wrapper (7.17.26016): starting 09:24:48 (1897): wrapper (7.17.26016): starting 09:24:48 (1897): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x570b3003ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7c7001045320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c700109eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c700104526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c70010288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c70010297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7c70010a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7c70010ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c70010add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x570b3005c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x570b3007b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7c7001045320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c70010ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c70010f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c700112972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x570b30051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x570b3001e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c700102a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c700102a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x570b3001aa3a] Exiting... 09:51:24 (1898): wrapper (7.17.26016): starting 09:51:24 (1898): wrapper (7.17.26016): starting 09:51:24 (1898): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6058de03ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x790015045320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79001509eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79001504526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7900150288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7900150297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7900150a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7900150ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7900150add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6058de05c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6058de07b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x790015045320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7900150ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7900150f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79001512972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6058de051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6058de01e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79001502a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79001502a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6058de01aa3a] Exiting... 20:06:03 (65747): wrapper (7.17.26016): starting 20:06:03 (65747): wrapper (7.17.26016): starting 20:06:03 (65747): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 20:06:06 (65747): cmdock exited; CPU time 2.015672 20:06:06 (65747): called boinc_finish(0) </stderr_txt> ]]>
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