Name | corona_RdRp_v2_sidock_01938825_r2_s-20_0 |
Workunit | 54073313 |
Created | 29 Aug 2024, 4:59:11 UTC |
Sent | 2 Sep 2024, 14:17:11 UTC |
Report deadline | 10 Sep 2024, 14:17:11 UTC |
Received | 5 Sep 2024, 1:06:27 UTC |
Server state | Over |
Outcome | Validate error |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 60274 |
Run time | 16 hours 24 min 21 sec |
CPU time | 16 hours 23 min 35 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 1.00 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 194.04 MB |
Peak swap size | 201.49 MB |
Peak disk usage | 20.51 MB |
<core_client_version>8.0.4</core_client_version> <![CDATA[ <stderr_txt> 09:26:10 (24962): wrapper (7.17.26016): starting 09:26:10 (24962): wrapper (7.17.26016): starting 09:26:10 (24962): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58010d03ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x788367645320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78836769eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78836764526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7883676288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7883676297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7883676a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7883676ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7883676add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58010d05c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58010d07b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x788367645320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7883676ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7883676f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78836772972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x58010d051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58010d01e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78836762a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78836762a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58010d01aa3a] Exiting... 20:06:03 (90138): wrapper (7.17.26016): starting 20:06:03 (90138): wrapper (7.17.26016): starting 20:06:03 (90138): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 21:17:53 (1925): wrapper (7.17.26016): starting 21:17:53 (1925): wrapper (7.17.26016): starting 21:17:53 (1925): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 23:24:44 (1929): wrapper (7.17.26016): starting 23:24:44 (1929): wrapper (7.17.26016): starting 23:24:44 (1929): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x617b46c3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x718d86645320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x718d8669eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x718d8664526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x718d866288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x718d866297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x718d866a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x718d866ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x718d866add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x617b46c5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x617b46c7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x718d86645320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x718d866ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x718d866f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x718d8672972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x617b46c51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x617b46c1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x718d8662a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x718d8662a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x617b46c1aa3a] Exiting... 21:01:49 (135478): wrapper (7.17.26016): starting 21:01:49 (135478): wrapper (7.17.26016): starting 21:01:49 (135478): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a5720a3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7cc6c2a45320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7cc6c2a9eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7cc6c2a4526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7cc6c2a288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7cc6c2a297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7cc6c2aa8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7cc6c2aab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7cc6c2aadd9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a5720a5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a5720a7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7cc6c2a45320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7cc6c2aecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7cc6c2af9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7cc6c2b2972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a5720a51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a5720a1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7cc6c2a2a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7cc6c2a2a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a5720a1aa3a] Exiting... 16:03:23 (3331): wrapper (7.17.26016): starting 16:03:23 (3331): wrapper (7.17.26016): starting 16:03:23 (3331): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5bdb9783ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x703f35845320] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x703f3589eb1c] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x703f3584526e] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x703f358288ff] /lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x703f358297b6] /lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x703f358a8fe5] /lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x703f358ab37c] /lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x703f358add9e] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5bdb9785c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5bdb9787b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x703f35845320] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x703f358ecadf] /lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x703f358f9a27] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x703f3592972c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5bdb97851adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5bdb9781e784] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x703f3582a1ca] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x703f3582a28b] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5bdb9781aa3a] Exiting... 20:06:03 (28346): wrapper (7.17.26016): starting 20:06:03 (28346): wrapper (7.17.26016): starting 20:06:03 (28346): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 20:06:06 (28346): cmdock exited; CPU time 2.129307 20:06:06 (28346): called boinc_finish(0) </stderr_txt> ]]>
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