Task 82164075

Name	corona_RdRp_v2_sidock_01787838_r2_s-20_0
Workunit	53552731
Created	2 Jul 2024, 4:46:06 UTC
Sent	4 Jul 2024, 19:12:24 UTC
Report deadline	10 Jul 2024, 19:12:24 UTC
Received	6 Jul 2024, 7:28:06 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	58409
Run time	21 hours 25 min 36 sec
CPU time	21 hours 23 min 11 sec
Validate state	Valid
Credit	948.35
Device peak FLOPS	8.61 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.46 MB
Peak swap size	200.24 MB
Peak disk usage	20.78 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:13:12 (1955): wrapper (7.17.26016): starting
22:13:12 (1955): wrapper (7.17.26016): starting
22:13:12 (1955): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (22 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55b2a923ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcc9bd38520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7fcc9bd8c9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7fcc9bd38476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fcc9bd1e7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7fcc9bd7f676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7fcc9bd96cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7fcc9bd98a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7fcc9bd9b453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55b2a925c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55b2a927b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcc9bd38520]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x55b2a923aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcc9bd38520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fcc9bddb7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fcc9bde0677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fcc9be11f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55b2a9251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55b2a921e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fcc9bd1fd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fcc9bd1fe40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55b2a921aa3a]

Exiting...
22:13:33 (1573): wrapper (7.17.26016): starting
22:13:34 (1573): wrapper (7.17.26016): starting
22:13:34 (1573): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:00:00 (17854): wrapper (7.17.26016): starting
22:00:01 (17854): wrapper (7.17.26016): starting
22:00:01 (17854): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:27:53 (17854): cmdock exited; CPU time 44787.802001
10:27:53 (17854): called boinc_finish(0)

</stderr_txt>
]]>