Task 82164054

Name	corona_RdRp_v2_sidock_01787824_r2_s-20_0
Workunit	53552703
Created	2 Jul 2024, 4:46:05 UTC
Sent	4 Jul 2024, 19:12:22 UTC
Report deadline	10 Jul 2024, 19:12:22 UTC
Received	6 Jul 2024, 6:32:30 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	58409
Run time	20 hours 32 min 29 sec
CPU time	20 hours 30 min 13 sec
Validate state	Valid
Credit	897.95
Device peak FLOPS	8.61 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.71 MB
Peak swap size	200.57 MB
Peak disk usage	20.66 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:12:31 (1779): wrapper (7.17.26016): starting
22:12:31 (1779): wrapper (7.17.26016): starting
22:12:31 (1779): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x560626c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f43b9a52520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f43b9aa69fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f43b9a52476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f43b9a387f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f43b9a99676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f43b9ab0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f43b9ab2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f43b9ab5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x560626c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x560626c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f43b9a52520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f43b9af57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f43b9afa677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f43b9b2bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560626c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x560626c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f43b9a39d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f43b9a39e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x560626c1aa3a]

Exiting...
22:13:33 (1554): wrapper (7.17.26016): starting
22:13:34 (1554): wrapper (7.17.26016): starting
22:13:34 (1554): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:00:00 (17827): wrapper (7.17.26016): starting
22:00:01 (17827): wrapper (7.17.26016): starting
22:00:01 (17827): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:32:17 (17827): cmdock exited; CPU time 41465.372033
09:32:17 (17827): called boinc_finish(0)

</stderr_txt>
]]>