Task 82119783

Name	corona_RdRp_v2_sidock_01753243_r1_s-20_1
Workunit	53463540
Created	24 Jun 2024, 12:32:01 UTC
Sent	1 Jul 2024, 8:50:42 UTC
Report deadline	7 Jul 2024, 8:50:42 UTC
Received	6 Jul 2024, 21:29:04 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	6928
Run time	3 days 4 hours 19 min 36 sec
CPU time	3 days 2 hours 38 min 16 sec
Validate state	Valid
Credit	1,704.63
Device peak FLOPS	5.06 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	192.53 MB
Peak swap size	201.19 MB
Peak disk usage	20.67 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:34:25 (115860): wrapper (7.17.26016): starting
23:34:25 (115860): wrapper (7.17.26016): starting
23:34:25 (115860): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:33:10 (2680): wrapper (7.17.26016): starting
16:33:11 (2680): wrapper (7.17.26016): starting
16:33:11 (2680): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62487823ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7ca24ba45320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7ca24ba9eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7ca24ba4526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7ca24ba288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7ca24ba297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7ca24baa8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7ca24baab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7ca24baadd9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62487825c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62487827b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7ca24ba45320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7ca24baecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ca24baf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7ca24bb2972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x624878251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62487821e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7ca24ba2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7ca24ba2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62487821aa3a]

Exiting...
16:34:27 (2655): wrapper (7.17.26016): starting
16:34:27 (2655): wrapper (7.17.26016): starting
16:34:27 (2655): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:39:19 (2680): wrapper (7.17.26016): starting
16:39:20 (2680): wrapper (7.17.26016): starting
16:39:20 (2680): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:46:18 (4882): wrapper (7.17.26016): starting
16:46:18 (4882): wrapper (7.17.26016): starting
16:46:18 (4882): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:32:28 (5034): wrapper (7.17.26016): starting
01:32:28 (5034): wrapper (7.17.26016): starting
01:32:28 (5034): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:28:53 (5034): cmdock exited; CPU time 179370.028562
04:28:53 (5034): called boinc_finish(0)

</stderr_txt>
]]>