Name | corona_RdRp_v2_sidock_01764246_r1_s-20_1 |
Workunit | 53485546 |
Created | 23 Jun 2024, 22:13:03 UTC |
Sent | 1 Jul 2024, 6:29:58 UTC |
Report deadline | 7 Jul 2024, 6:29:58 UTC |
Received | 4 Jul 2024, 20:57:27 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 50430 |
Run time | 1 days 19 hours 28 min 10 sec |
CPU time | 1 days 19 hours 23 min 53 sec |
Validate state | Valid |
Credit | 1,550.82 |
Device peak FLOPS | 6.99 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 194.12 MB |
Peak swap size | 200.93 MB |
Peak disk usage | 20.69 MB |
<core_client_version>7.20.5</core_client_version> <![CDATA[ <stderr_txt> 02:43:44 (2131027): wrapper (7.17.26016): starting 02:43:44 (2131027): wrapper (7.17.26016): starting 02:43:44 (2131027): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56546243ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7315d3042520] /lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7315d30a53fe] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56546245c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56546247b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7315d3042520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7315d30e57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7315d30ea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7315d311bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x565462451adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56546241e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7315d3029d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7315d3029e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56546241aa3a] Exiting... 08:00:04 (2134590): wrapper (7.17.26016): starting 08:00:04 (2134590): wrapper (7.17.26016): starting 08:00:04 (2134590): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x631583c3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fa593642520] /lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7fa5936a53fe] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x631583c5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x631583c7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fa593642520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fa5936e57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fa5936ea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fa59371bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x631583c51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x631583c1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fa593629d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fa593629e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x631583c1aa3a] Exiting... 16:00:03 (2139622): wrapper (7.17.26016): starting 16:00:03 (2139622): wrapper (7.17.26016): starting 16:00:03 (2139622): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55605943ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7351bec42520] /lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7351beca53fe] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55605945c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55605947b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7351bec42520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7351bece57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7351becea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7351bed1bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x556059451adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55605941e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7351bec29d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7351bec29e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55605941aa3a] Exiting... 00:00:07 (2144840): wrapper (7.17.26016): starting 00:00:07 (2144840): wrapper (7.17.26016): starting 00:00:07 (2144840): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f1ab583ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x74bde8842520] /lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x74bde88a53fe] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f1ab585c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f1ab587b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x74bde8842520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x74bde88e57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x74bde88ea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x74bde891bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f1ab5851adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f1ab581e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x74bde8829d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x74bde8829e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f1ab581aa3a] Exiting... 08:00:03 (2150508): wrapper (7.17.26016): starting 08:00:03 (2150508): wrapper (7.17.26016): starting 08:00:03 (2150508): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6099ce03ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f22b0e42520] /lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7f22b0ea53fe] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6099ce05c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6099ce07b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f22b0e42520] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f22b0ee57f8] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f22b0eea677] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f22b0f1bf2f] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6099ce051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6099ce01e784] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f22b0e29d90] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f22b0e29e40] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6099ce01aa3a] Exiting... 16:00:04 (2155493): wrapper (7.17.26016): starting 16:00:04 (2155493): wrapper (7.17.26016): starting 16:00:04 (2155493): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 22:57:16 (2155493): cmdock exited; CPU time 24982.542445 22:57:16 (2155493): called boinc_finish(0) </stderr_txt> ]]>
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