Task 82118817

Name	corona_RdRp_v2_sidock_01764234_r2_s-20_1
Workunit	53485523
Created	23 Jun 2024, 21:57:58 UTC
Sent	1 Jul 2024, 6:20:57 UTC
Report deadline	7 Jul 2024, 6:20:57 UTC
Received	3 Jul 2024, 15:47:41 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	58242
Run time	1 days 12 hours 58 min 40 sec
CPU time	1 days 11 hours 59 min
Validate state	Valid
Credit	1,289.11
Device peak FLOPS	6.66 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	194.36 MB
Peak swap size	201.13 MB
Peak disk usage	20.56 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
08:21:02 (2584333): wrapper (7.17.26016): starting
08:21:02 (2584333): wrapper (7.17.26016): starting
08:21:02 (2584333): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x565451114f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f5750033420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f574fe7000b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f574fe4f859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f574feba26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f574fec22fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f574fec3b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5654511313dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5654511508e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f574fe70090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f574ff0a23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f574ff0fec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f574ff42a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x565451126adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5654510f3784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f574fe51083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5654510efa3a]

Exiting...
11:42:04 (3101): wrapper (7.17.26016): starting
11:42:04 (3101): wrapper (7.17.26016): starting
11:42:04 (3101): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:00:28 (1562029): wrapper (7.17.26016): starting
13:00:28 (1562029): wrapper (7.17.26016): starting
13:00:28 (1562029): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:04:15 (1781089): wrapper (7.17.26016): starting
15:04:16 (1781089): wrapper (7.17.26016): starting
15:04:16 (1781089): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:47:34 (1781089): cmdock exited; CPU time 9386.365539
17:47:34 (1781089): called boinc_finish(0)

</stderr_txt>
]]>