Task 82115647

Name	corona_RdRp_v2_sidock_01779807_r2_s-20_0
Workunit	53516669
Created	21 Jun 2024, 16:38:03 UTC
Sent	30 Jun 2024, 20:50:47 UTC
Report deadline	6 Jul 2024, 20:50:47 UTC
Received	1 Jul 2024, 16:44:07 UTC
Server state	Over
Outcome	Validate error
Client state	Done
Exit status	0 (0x00000000)
Computer ID	55196
Run time	16 hours 44 min 12 sec
CPU time	16 hours 44 min 12 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	7.51 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.90 MB
Peak swap size	200.57 MB
Peak disk usage	20.37 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
16:56:00 (2700210): wrapper (7.17.26016): starting
16:56:00 (2700210): wrapper (7.17.26016): starting
16:56:00 (2700210): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:36:25 (9779): wrapper (7.17.26016): starting
12:36:25 (9779): wrapper (7.17.26016): starting
12:36:25 (9779): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x561f15a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f715b027520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f715b07b9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f715b027476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f715b00d7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f715b06e676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f715b085cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f715b087a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f715b08a453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x561f15a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x561f15a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f715b027520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f715b0ca7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f715b0cf677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f715b100f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x561f15a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x561f15a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f715b00ed90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f715b00ee40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x561f15a1aa3a]

Exiting...
12:41:56 (66786): wrapper (7.17.26016): starting
12:41:56 (66786): wrapper (7.17.26016): starting
12:41:56 (66786): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:41:59 (66786): cmdock exited; CPU time 2.422074
12:41:59 (66786): called boinc_finish(0)

</stderr_txt>
]]>