Task 82107930

Name corona_RdRp_v2_sidock_01775962_r1_s-20_0
Workunit 53508978
Created 21 Jun 2024, 16:30:40 UTC
Sent 29 Jun 2024, 6:01:45 UTC
Report deadline 5 Jul 2024, 6:01:45 UTC
Received 30 Jun 2024, 2:21:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 25512
Run time 18 hours 48 min 28 sec
CPU time 18 hours 45 min 32 sec
Validate state Valid
Credit 737.96
Device peak FLOPS 7.02 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 192.67 MB
Peak swap size 198.76 MB
Peak disk usage 20.75 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
08:01:50 (632461): wrapper (7.17.26016): starting
08:01:50 (632461): wrapper (7.17.26016): starting
08:01:50 (632461): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55563c43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f1c2f93e050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7f1c2f99ae3a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55563c45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55563c47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f1c2f93e050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f1c2f9d1485]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f1c2f9d5d93]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f1c2fa01185]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55563c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55563c41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f1c2f92924a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f1c2f929305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55563c41aa3a]

Exiting...
00:46:43 (1488): wrapper (7.17.26016): starting
00:46:44 (1488): wrapper (7.17.26016): starting
00:46:44 (1488): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:20:59 (1488): cmdock exited; CPU time 12671.693076
04:20:59 (1488): called boinc_finish(0)

</stderr_txt>
]]>


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