Task 82101625

Name corona_RdRp_v2_sidock_01772797_r1_s-20_0
Workunit 53502648
Created 21 Jun 2024, 16:24:48 UTC
Sent 27 Jun 2024, 19:44:05 UTC
Report deadline 3 Jul 2024, 19:44:05 UTC
Received 28 Jun 2024, 19:26:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 22 hours 3 min 30 sec
CPU time 22 hours 2 min 29 sec
Validate state Valid
Credit 820.06
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.14 MB
Peak swap size 200.88 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:16 (12476): wrapper (7.17.26016): starting
23:47:16 (12476): wrapper (7.17.26016): starting
23:47:16 (12476): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5575840adf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7faad67d93c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7faad661603b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7faad65f5859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7faad666029e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7faad666832c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7faad6669b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5575840ca3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5575840e98e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7faad66160c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7faad66b026f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7faad66b5ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7faad66e888f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5575840bfadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55758408c784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7faad65f70b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557584088a3a]

Exiting...
13:55:03 (4887): wrapper (7.17.26016): starting
13:55:03 (4887): wrapper (7.17.26016): starting
13:55:03 (4887): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:26:19 (4887): cmdock exited; CPU time 30634.493854
22:26:19 (4887): called boinc_finish(0)

</stderr_txt>
]]>


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