Task 82097973

Name	corona_RdRp_v2_sidock_01770971_r2_s-20_0
Workunit	53498997
Created	21 Jun 2024, 16:21:18 UTC
Sent	27 Jun 2024, 2:13:11 UTC
Report deadline	3 Jul 2024, 2:13:11 UTC
Received	4 Jul 2024, 23:09:17 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	57304
Run time	2 days 15 hours 38 min 23 sec
CPU time	2 days 15 hours 21 min 32 sec
Validate state	Valid
Credit	2,506.65
Device peak FLOPS	9.23 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.86 MB
Peak swap size	200.60 MB
Peak disk usage	21.01 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
04:19:57 (2476361): wrapper (7.17.26016): starting
04:19:58 (2476361): wrapper (7.17.26016): starting
04:19:58 (2476361): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56155c23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f67ff7fa520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f67ff84e9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f67ff7fa476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f67ff7e07f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f67ff841676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f67ff858cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f67ff85aa44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f67ff85d453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56155c25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56155c27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f67ff7fa520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f67ff89d7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f67ff8a2677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f67ff8d3f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56155c251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56155c21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f67ff7e1d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f67ff7e1e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56155c21aa3a]

Exiting...
13:08:23 (2538524): wrapper (7.17.26016): starting
13:08:23 (2538524): wrapper (7.17.26016): starting
13:08:23 (2538524): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x555f86a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f99012d4520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f99013289fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f99012d4476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f99012ba7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7f990131b676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7f9901332cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7f9901334a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7f9901337453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x555f86a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x555f86a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f99012d4520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f99013777f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f990137c677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f99013adf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x555f86a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x555f86a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f99012bbd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f99012bbe40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x555f86a1aa3a]

Exiting...
18:11:54 (253296): wrapper (7.17.26016): starting
18:11:54 (253296): wrapper (7.17.26016): starting
18:11:54 (253296): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:09:06 (253296): cmdock exited; CPU time 111391.421611
01:09:06 (253296): called boinc_finish(0)

</stderr_txt>
]]>