Task 82096338

Name	corona_RdRp_v2_sidock_01770151_r2_s-20_0
Workunit	53497357
Created	21 Jun 2024, 16:19:48 UTC
Sent	26 Jun 2024, 15:19:50 UTC
Report deadline	2 Jul 2024, 15:19:50 UTC
Received	28 Jun 2024, 6:00:46 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	18776
Run time	20 hours 53 min 30 sec
CPU time	20 hours 53 min 20 sec
Validate state	Valid
Credit	742.24
Device peak FLOPS	3.27 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	192.82 MB
Peak swap size	199.57 MB
Peak disk usage	20.69 MB

Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
04:05:19 (28489): wrapper (7.17.26016): starting
04:05:19 (28489): wrapper (7.17.26016): starting
04:05:19 (28489): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/roland/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x557ad5a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fabffb1c520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7fabffb709fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7fabffb1c476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fabffb027f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7fabffb63676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7fabffb7acfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7fabffb7ca44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7fabffb7f453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x557ad5a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x557ad5a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fabffb1c520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fabffbbf7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fabffbc4677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fabffbf5f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x557ad5a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x557ad5a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fabffb03d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fabffb03e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557ad5a1aa3a]

Exiting...
14:22:38 (1596): wrapper (7.17.26016): starting
14:22:38 (1596): wrapper (7.17.26016): starting
14:22:38 (1596): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/roland/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:00:35 (1596): cmdock exited; CPU time 38273.878162
01:00:35 (1596): called boinc_finish(0)

</stderr_txt>
]]>