Task 82092516

Name	corona_RdRp_v2_sidock_01768237_r1_s-20_0
Workunit	53493528
Created	21 Jun 2024, 16:16:11 UTC
Sent	25 Jun 2024, 17:43:00 UTC
Report deadline	1 Jul 2024, 17:43:00 UTC
Received	27 Jun 2024, 10:19:36 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	55179
Run time	1 days 14 hours 36 min
CPU time	1 days 14 hours 26 min 18 sec
Validate state	Valid
Credit	1,008.10
Device peak FLOPS	5.77 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.45 MB
Peak swap size	200.42 MB
Peak disk usage	20.56 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:31:20 (4788): wrapper (7.17.26016): starting
22:31:20 (4788): wrapper (7.17.26016): starting
22:31:20 (4788): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x581ee203ff8c]
/usr/lib/libc.so.6(+0x414b0)[0x75e1ce4b14b0]
/usr/lib/libc.so.6(__libc_free+0x1e)[0x75e1ce51dede]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x581ee205c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x581ee207b8e4]
/usr/lib/libc.so.6(+0x414b0)[0x75e1ce4b14b0]
/usr/lib/libc.so.6(clock_nanosleep+0x65)[0x75e1ce54df85]
/usr/lib/libc.so.6(nanosleep+0x17)[0x75e1ce55b447]
/usr/lib/libc.so.6(sleep+0x3c)[0x75e1ce57215c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x581ee2051a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x581ee201e784]
/usr/lib/libc.so.6(+0x25f8e)[0x75e1ce495f8e]
/usr/lib/libc.so.6(__libc_start_main+0x8a)[0x75e1ce49604a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x581ee201aa3a]

Exiting...
08:12:12 (4938): wrapper (7.17.26016): starting
08:12:12 (4938): wrapper (7.17.26016): starting
08:12:12 (4938): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e625d03ff8c]
/usr/lib/libc.so.6(+0x414b0)[0x7ba8cfadd4b0]
/usr/lib/libc.so.6(__libc_free+0x1e)[0x7ba8cfb49ede]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e625d05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e625d07b8e4]
/usr/lib/libc.so.6(+0x414b0)[0x7ba8cfadd4b0]
/usr/lib/libc.so.6(clock_nanosleep+0x65)[0x7ba8cfb79f85]
/usr/lib/libc.so.6(nanosleep+0x17)[0x7ba8cfb87447]
/usr/lib/libc.so.6(usleep+0x47)[0x7ba8cfbb7977]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e625d051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e625d01e784]
/usr/lib/libc.so.6(+0x25f8e)[0x7ba8cfac1f8e]
/usr/lib/libc.so.6(__libc_start_main+0x8a)[0x7ba8cfac204a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e625d01aa3a]

Exiting...
16:55:22 (4722): wrapper (7.17.26016): starting
16:55:22 (4722): wrapper (7.17.26016): starting
16:55:22 (4722): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59c1d463ff8c]
/usr/lib/libc.so.6(+0x414b0)[0x7cb6b16374b0]
/usr/lib/libc.so.6(__libc_free+0x1e)[0x7cb6b16a3ede]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59c1d465c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59c1d467b8e4]
/usr/lib/libc.so.6(+0x414b0)[0x7cb6b16374b0]
/usr/lib/libc.so.6(clock_nanosleep+0x65)[0x7cb6b16d3f85]
/usr/lib/libc.so.6(nanosleep+0x17)[0x7cb6b16e1447]
/usr/lib/libc.so.6(usleep+0x47)[0x7cb6b1711977]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59c1d4651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59c1d461e784]
/usr/lib/libc.so.6(+0x25f8e)[0x7cb6b161bf8e]
/usr/lib/libc.so.6(__libc_start_main+0x8a)[0x7cb6b161c04a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59c1d461aa3a]

Exiting...
08:16:51 (4929): wrapper (7.17.26016): starting
08:16:52 (4929): wrapper (7.17.26016): starting
08:16:52 (4929): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:19:26 (4929): cmdock exited; CPU time 18032.089293
13:19:26 (4929): called boinc_finish(0)

</stderr_txt>
]]>