Task 82089273

Name corona_RdRp_v2_sidock_01766635_r2_s-20_0
Workunit 53490325
Created 21 Jun 2024, 16:12:59 UTC
Sent 24 Jun 2024, 23:29:23 UTC
Report deadline 30 Jun 2024, 23:29:23 UTC
Received 25 Jun 2024, 20:26:03 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54796
Run time 5 sec
CPU time 1 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 11.54 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak disk usage 20.13 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
02:29:31 (27430): wrapper (7.17.26016): starting
02:29:31 (27430): wrapper (7.17.26016): starting
02:29:31 (27430): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564e3523ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fd0da60b050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8ae2c)[0x7fd0da659e2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7fd0da60afb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fd0da5f5472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f430)[0x7fd0da64e430]
/lib/x86_64-linux-gnu/libc.so.6(+0x947aa)[0x7fd0da6637aa]
/lib/x86_64-linux-gnu/libc.so.6(+0x96534)[0x7fd0da665534]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7fd0da667e8f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564e3525c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564e3527b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fd0da60b050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fd0da69e485]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fd0da6a2d93]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fd0da6ce185]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564e35251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564e3521e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fd0da5f624a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fd0da5f6305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564e3521aa3a]

Exiting...
23:25:10 (4466): wrapper (7.17.26016): starting
23:25:10 (4466): wrapper (7.17.26016): starting
23:25:10 (4466): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:25:12 (4466): cmdock exited; CPU time 1.469076
23:25:12 (4466): called boinc_finish(0)

</stderr_txt>
]]>


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