Task 82079580

Name	corona_RdRp_v2_sidock_01761784_r2_s-20_0
Workunit	53480623
Created	21 Jun 2024, 16:03:31 UTC
Sent	22 Jun 2024, 17:04:45 UTC
Report deadline	28 Jun 2024, 17:04:45 UTC
Received	25 Jun 2024, 18:57:19 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	1 days 11 hours 11 min 28 sec
CPU time	1 days 11 hours 9 min 8 sec
Validate state	Valid
Credit	1,374.75
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.51 MB
Peak swap size	199.99 MB
Peak disk usage	20.40 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
21:45:50 (60602): wrapper (7.17.26016): starting
21:45:50 (60602): wrapper (7.17.26016): starting
21:45:50 (60602): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55b98b780f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f2f608613c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f2f6069e03b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f2f6067d859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f2f606e829e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f2f606f032c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f2f606f1b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55b98b79d3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55b98b7bc8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f2f6069e0c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f2f6073826f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f2f6073def7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f2f6077088f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55b98b792adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55b98b75f784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f2f6067f0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55b98b75ba3a]

Exiting...
00:21:58 (13234): wrapper (7.17.26016): starting
00:21:59 (13234): wrapper (7.17.26016): starting
00:21:59 (13234): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x560c2f4d8f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f3f694a33c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f3f692e003b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f3f692bf859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f3f6932a29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f3f6933232c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f3f69333b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x560c2f4f53dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x560c2f5148e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f3f692e00c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f3f6937a26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f3f6937fef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f3f693b288f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560c2f4eaadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x560c2f4b7784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f3f692c10b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x560c2f4b3a3a]

Exiting...
15:05:11 (3617): wrapper (7.17.26016): starting
15:05:12 (3617): wrapper (7.17.26016): starting
15:05:12 (3617): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:57:08 (3617): cmdock exited; CPU time 24683.218787
21:57:08 (3617): called boinc_finish(0)

</stderr_txt>
]]>