Task 82079393

Name	corona_RdRp_v2_sidock_01761685_r2_s-20_0
Workunit	53480425
Created	21 Jun 2024, 16:03:16 UTC
Sent	22 Jun 2024, 15:44:39 UTC
Report deadline	28 Jun 2024, 15:44:39 UTC
Received	25 Jun 2024, 16:51:25 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	1 days 9 hours 52 min 31 sec
CPU time	1 days 9 hours 50 min 14 sec
Validate state	Valid
Credit	1,320.31
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	194.04 MB
Peak swap size	200.64 MB
Peak disk usage	20.48 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:35 (59453): wrapper (7.17.26016): starting
20:53:35 (59453): wrapper (7.17.26016): starting
20:53:35 (59453): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c031199f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f5ddebdc3c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f5ddea1903b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f5dde9f8859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f5ddea6329e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f5ddea6b32c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f5ddea6cb5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c0311b63dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c0311d58e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f5ddea190c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f5ddeab326f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f5ddeab8ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f5ddeaeb88f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c0311abadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c031178784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f5dde9fa0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c031174a3a]

Exiting...
00:21:58 (13232): wrapper (7.17.26016): starting
00:21:59 (13232): wrapper (7.17.26016): starting
00:21:59 (13232): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5594e2cb9f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fddba2843c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fddba0c103b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fddba0a0859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7fddba10b29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7fddba11332c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7fddba114b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5594e2cd63dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5594e2cf58e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7fddba0c10c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fddba15b26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fddba160ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fddba19388f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5594e2ccbadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5594e2c98784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fddba0a20b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5594e2c94a3a]

Exiting...
15:05:11 (3615): wrapper (7.17.26016): starting
15:05:12 (3615): wrapper (7.17.26016): starting
15:05:12 (3615): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:51:14 (3615): cmdock exited; CPU time 17140.184218
19:51:14 (3615): called boinc_finish(0)

</stderr_txt>
]]>