Task 82078741

Name	corona_RdRp_v2_sidock_01761361_r2_s-20_0
Workunit	53479777
Created	21 Jun 2024, 16:02:43 UTC
Sent	22 Jun 2024, 11:24:33 UTC
Report deadline	28 Jun 2024, 11:24:33 UTC
Received	25 Jun 2024, 18:47:22 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	1 days 16 hours 5 min 58 sec
CPU time	1 days 16 hours 3 min 19 sec
Validate state	Valid
Credit	1,571.74
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.79 MB
Peak swap size	200.45 MB
Peak disk usage	20.52 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:40 (54208): wrapper (7.17.26016): starting
16:44:40 (54208): wrapper (7.17.26016): starting
16:44:40 (54208): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5639994f8f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f97fb7633c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f97fb5a003b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f97fb57f859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f97fb5ea29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f97fb5f232c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f97fb5f3b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5639995153dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5639995348e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f97fb5a00c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f97fb63a26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f97fb63fef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f97fb67288f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56399950aadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5639994d7784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f97fb5810b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5639994d3a3a]

Exiting...
00:21:58 (13231): wrapper (7.17.26016): starting
00:21:59 (13231): wrapper (7.17.26016): starting
00:21:59 (13231): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x563d8e021f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f1c4aeb93c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f1c4acf603b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f1c4acd5859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f1c4ad4029e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f1c4ad4832c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f1c4ad49b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x563d8e03e3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x563d8e05d8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f1c4acf60c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f1c4ad9026f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f1c4ad95ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f1c4adc888f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563d8e033adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x563d8e000784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f1c4acd70b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x563d8dffca3a]

Exiting...
15:05:11 (3614): wrapper (7.17.26016): starting
15:05:12 (3614): wrapper (7.17.26016): starting
15:05:12 (3614): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:47:12 (3614): cmdock exited; CPU time 24088.758022
21:47:12 (3614): called boinc_finish(0)

</stderr_txt>
]]>