Task 82076419

Name corona_RdRp_v2_sidock_01760206_r2_s-20_0
Workunit 53477467
Created 21 Jun 2024, 16:00:32 UTC
Sent 21 Jun 2024, 21:56:06 UTC
Report deadline 27 Jun 2024, 21:56:06 UTC
Received 23 Jun 2024, 11:55:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 1 days 10 hours 47 min 28 sec
CPU time 1 days 10 hours 45 min 17 sec
Validate state Valid
Credit 1,432.54
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.66 MB
Peak swap size 201.19 MB
Peak disk usage 20.55 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
03:14:44 (36105): wrapper (7.17.26016): starting
03:14:44 (36105): wrapper (7.17.26016): starting
03:14:44 (36105): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55e7d06a3f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fe8b973d3c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fe8b957a03b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fe8b9559859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7fe8b95c429e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7fe8b95cc32c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7fe8b95cdb5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55e7d06c03dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55e7d06df8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7fe8b957a0c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fe8b961426f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fe8b9619ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fe8b964c88f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55e7d06b5adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55e7d0682784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fe8b955b0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55e7d067ea3a]

Exiting...
00:21:58 (13229): wrapper (7.17.26016): starting
00:21:59 (13229): wrapper (7.17.26016): starting
00:21:59 (13229): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:55:35 (13229): cmdock exited; CPU time 52341.642085
14:55:35 (13229): called boinc_finish(0)

</stderr_txt>
]]>


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