Task 82075790

Name corona_RdRp_v2_sidock_01756393_r2_s-20_1
Workunit 53469841
Created 21 Jun 2024, 10:28:37 UTC
Sent 21 Jun 2024, 19:05:35 UTC
Report deadline 27 Jun 2024, 19:05:35 UTC
Received 23 Jun 2024, 7:45:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 1 days 9 hours 46 min 15 sec
CPU time 1 days 9 hours 44 min 14 sec
Validate state Valid
Credit 1,375.65
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.37 MB
Peak swap size 200.88 MB
Peak disk usage 20.56 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:14 (31211): wrapper (7.17.26016): starting
00:04:14 (31211): wrapper (7.17.26016): starting
00:04:14 (31211): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558b016c6f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f21776373c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f217747403b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f2177453859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f21774be29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f21774c632c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f21774c7b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558b016e33dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558b017028e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f21774740c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f217750e26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f2177513ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f217754688f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558b016d8adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x558b016a5784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f21774550b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558b016a1a3a]

Exiting...
00:21:58 (13227): wrapper (7.17.26016): starting
00:21:59 (13227): wrapper (7.17.26016): starting
00:21:59 (13227): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:44:51 (13227): cmdock exited; CPU time 37326.625235
10:44:51 (13227): called boinc_finish(0)

</stderr_txt>
]]>


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