Task 82060403

Name corona_RdRp_v2_sidock_01757485_r2_s-20_0
Workunit 53472025
Created 14 Jun 2024, 2:03:35 UTC
Sent 19 Jun 2024, 15:43:18 UTC
Report deadline 25 Jun 2024, 15:43:18 UTC
Received 22 Jun 2024, 17:54:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 1 days 13 hours 45 min 55 sec
CPU time 1 days 13 hours 42 min 56 sec
Validate state Valid
Credit 1,523.03
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 193.72 MB
Peak swap size 200.45 MB
Peak disk usage 20.45 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:59 (25240): wrapper (7.17.26016): starting
20:13:59 (25240): wrapper (7.17.26016): starting
20:13:59 (25240): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55badf78ef8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fe2e7d2d3c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fe2e7b6a03b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fe2e7b49859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7fe2e7bb429e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7fe2e7bbc32c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7fe2e7bbdb5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55badf7ab3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55badf7ca8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7fe2e7b6a0c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fe2e7c0426f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fe2e7c09ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fe2e7c3c88f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55badf7a0adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55badf76d784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fe2e7b4b0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55badf769a3a]

Exiting...
10:03:32 (6232): wrapper (7.17.26016): starting
10:03:33 (6232): wrapper (7.17.26016): starting
10:03:33 (6232): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:54:10 (6232): cmdock exited; CPU time 125253.419013
20:54:10 (6232): called boinc_finish(0)

</stderr_txt>
]]>


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