Task 82058601

Name corona_RdRp_v2_sidock_01756598_r2_s-20_0
Workunit 53470251
Created 14 Jun 2024, 2:01:54 UTC
Sent 19 Jun 2024, 10:21:26 UTC
Report deadline 25 Jun 2024, 10:21:26 UTC
Received 19 Jun 2024, 10:44:45 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 59059
Run time 3 sec
CPU time 1 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak disk usage 20.20 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:40 (16087): wrapper (7.17.26016): starting
13:21:40 (16087): wrapper (7.17.26016): starting
13:21:40 (16087): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559aa6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x72b09b245320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72b09b29eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72b09b24526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72b09b2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72b09b2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x72b09b2a8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x72b09b2ab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72b09b2add9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559aa6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559aa6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x72b09b245320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72b09b2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72b09b2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72b09b32972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559aa6c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559aa6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72b09b22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72b09b22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559aa6c1aa3a]

Exiting...
13:44:26 (18477): wrapper (7.17.26016): starting
13:44:26 (18477): wrapper (7.17.26016): starting
13:44:26 (18477): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:44:28 (18477): cmdock exited; CPU time 1.271634
13:44:28 (18477): called boinc_finish(0)

</stderr_txt>
]]>


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