Task 82051367

Name corona_RdRp_v2_sidock_01752988_r1_s-20_0
Workunit 53463030
Created 14 Jun 2024, 1:54:56 UTC
Sent 18 Jun 2024, 10:18:02 UTC
Report deadline 24 Jun 2024, 10:18:02 UTC
Received 20 Jun 2024, 6:08:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 31491
Run time 6 hours 53 min 52 sec
CPU time 6 hours 52 min 58 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.20 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.36 MB
Peak swap size 201.88 MB
Peak disk usage 20.20 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
11:36:02 (17986): wrapper (7.17.26016): starting
11:36:03 (17986): wrapper (7.17.26016): starting
11:36:03 (17986): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6219ec43ff8c]
/usr/lib/libc.so.6(+0x3cae0)[0x7d374774aae0]
/usr/lib/libc.so.6(__libc_free+0x25)[0x7d37477b1d55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6219ec45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6219ec47b8e4]
/usr/lib/libc.so.6(+0x3cae0)[0x7d374774aae0]
/usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7d37477ecf43]
/usr/lib/libc.so.6(nanosleep+0x17)[0x7d37477f8d77]
/usr/lib/libc.so.6(usleep+0x4a)[0x7d3747823bda]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6219ec451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6219ec41e784]
/usr/lib/libc.so.6(+0x25c88)[0x7d3747733c88]
/usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7d3747733d4c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6219ec41aa3a]

Exiting...
07:54:14 (10260): wrapper (7.17.26016): starting
07:54:14 (10260): wrapper (7.17.26016): starting
07:54:14 (10260): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:07:05 (10260): cmdock exited; CPU time 616.743211
08:07:05 (10260): app exit status: 0x8b
08:07:05 (10260): called boinc_finish(195)

</stderr_txt>
]]>


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