Task 82051168

Name corona_RdRp_v2_sidock_01752889_r1_s-20_0
Workunit 53462832
Created 14 Jun 2024, 1:54:48 UTC
Sent 18 Jun 2024, 9:35:00 UTC
Report deadline 24 Jun 2024, 9:35:00 UTC
Received 24 Jun 2024, 15:29:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 19472
Run time 2 days 19 hours 12 min 56 sec
CPU time 2 days 19 hours 12 min 29 sec
Validate state Valid
Credit 1,895.76
Device peak FLOPS 6.21 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.04 MB
Peak swap size 200.90 MB
Peak disk usage 20.61 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
13:50:39 (5447): wrapper (7.17.26016): starting
13:50:40 (5447): wrapper (7.17.26016): starting
13:50:40 (5447): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/sda3/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55e2d323ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f06e322f520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7f06e32923fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55e2d325c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55e2d327b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f06e322f520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f06e32d27f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f06e32d7677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f06e3308f2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55e2d3251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55e2d321e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f06e3216d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f06e3216e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55e2d321aa3a]

Exiting...
13:55:28 (7489): wrapper (7.17.26016): starting
13:55:28 (7489): wrapper (7.17.26016): starting
13:55:28 (7489): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/sda3/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:29:46 (7489): cmdock exited; CPU time 185599.316495
17:29:46 (7489): called boinc_finish(0)

</stderr_txt>
]]>


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