Task 82049784

Name corona_RdRp_v2_sidock_01752195_r2_s-20_0
Workunit 53461445
Created 14 Jun 2024, 1:53:32 UTC
Sent 18 Jun 2024, 5:10:33 UTC
Report deadline 24 Jun 2024, 5:10:33 UTC
Received 20 Jun 2024, 4:38:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 52321
Run time 1 days 23 hours 10 min 11 sec
CPU time 1 days 22 hours 57 min 55 sec
Validate state Valid
Credit 1,685.72
Device peak FLOPS 5.31 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.73 MB
Peak swap size 200.96 MB
Peak disk usage 20.57 MB

Stderr output

<core_client_version>7.22.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:38 (31804): wrapper (7.17.26016): starting
08:10:39 (31804): wrapper (7.17.26016): starting
08:10:39 (31804): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:18:14 (2596): wrapper (7.17.26016): starting
20:18:14 (2596): wrapper (7.17.26016): starting
20:18:14 (2596): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55890743ff8c]
/lib64/libpthread.so.0(+0x16910)[0x7fd2f96a8910]
/lib64/libc.so.6(gsignal+0x10d)[0x7fd2f94e5d2b]
/lib64/libc.so.6(abort+0x177)[0x7fd2f94e73e5]
/lib64/libc.so.6(+0x90c87)[0x7fd2f952bc87]
/lib64/libc.so.6(+0x98d2a)[0x7fd2f9533d2a]
/lib64/libc.so.6(+0x9a7d4)[0x7fd2f95357d4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55890745c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55890747b8e4]
/lib64/libc.so.6(+0x4adc0)[0x7fd2f94e5dc0]
/lib64/libc.so.6(clock_nanosleep+0x83)[0x7fd2f9577181]
/lib64/libc.so.6(nanosleep+0x15)[0x7fd2f957cea3]
/lib64/libc.so.6(usleep+0x46)[0x7fd2f95a9ad4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558907451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55890741e784]
/lib64/libc.so.6(__libc_start_main+0xef)[0x7fd2f94d024d]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55890741aa3a]

Exiting...
21:06:14 (3046): wrapper (7.17.26016): starting
21:06:14 (3046): wrapper (7.17.26016): starting
21:06:14 (3046): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:38:07 (3046): cmdock exited; CPU time 37596.584185
07:38:07 (3046): called boinc_finish(0)

</stderr_txt>
]]>


©2024 SiDock@home Team