Task 82043536

Name	corona_RdRp_v2_sidock_01749085_r2_s-20_0
Workunit	53455225
Created	14 Jun 2024, 1:47:46 UTC
Sent	17 Jun 2024, 8:19:31 UTC
Report deadline	23 Jun 2024, 8:19:31 UTC
Received	22 Jun 2024, 4:01:26 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	40246
Run time	1 days 21 hours 37 min 47 sec
CPU time	1 days 21 hours 26 min 36 sec
Validate state	Valid
Credit	1,565.00
Device peak FLOPS	6.39 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.34 MB
Peak swap size	200.58 MB
Peak disk usage	20.92 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
10:22:30 (3310710): wrapper (7.17.26016): starting
10:22:30 (3310710): wrapper (7.17.26016): starting
10:22:30 (3310710): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64361203ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x749ab7842520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x749ab78a53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64361205c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64361207b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x749ab7842520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x749ab78e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x749ab78ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x749ab791bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x643612051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64361201e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x749ab7829d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x749ab7829e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64361201aa3a]

Exiting...
16:57:48 (280722): wrapper (7.17.26016): starting
16:57:48 (280722): wrapper (7.17.26016): starting
16:57:48 (280722): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a0acac3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7dacfae42520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7dacfaea53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a0acac5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a0acac7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7dacfae42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7dacfaee57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7dacfaeea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7dacfaf1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a0acac51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a0acac1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7dacfae29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7dacfae29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a0acac1aa3a]

Exiting...
17:29:21 (1903): wrapper (7.17.26016): starting
17:29:22 (1903): wrapper (7.17.26016): starting
17:29:22 (1903): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:01:13 (1903): cmdock exited; CPU time 45063.561565
06:01:13 (1903): called boinc_finish(0)

</stderr_txt>
]]>