Task 82041568

Name	corona_RdRp_v2_sidock_01748100_r2_s-20_0
Workunit	53453255
Created	14 Jun 2024, 1:45:57 UTC
Sent	17 Jun 2024, 0:54:23 UTC
Report deadline	23 Jun 2024, 0:54:23 UTC
Received	22 Jun 2024, 17:06:54 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	19471
Run time	3 days 10 hours 16 min 33 sec
CPU time	3 days 10 hours 13 min 44 sec
Validate state	Valid
Credit	1,884.22
Device peak FLOPS	4.33 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.31 MB
Peak swap size	200.66 MB
Peak disk usage	20.60 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:54:28 (46690): wrapper (7.17.26016): starting
02:54:28 (46690): wrapper (7.17.26016): starting
02:54:28 (46690): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/boinc/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x595469e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7d9de7a45320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d9de7a9eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d9de7a4526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d9de7a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d9de7a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7d9de7aa8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7d9de7aab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d9de7aadd9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x595469e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x595469e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7d9de7a45320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d9de7aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d9de7af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d9de7b2972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x595469e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x595469e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d9de7a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d9de7a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x595469e1aa3a]

Exiting...
10:01:39 (2146): wrapper (7.17.26016): starting
10:01:39 (2146): wrapper (7.17.26016): starting
10:01:39 (2146): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/boinc/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x597ce5a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7aabdb645320]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7aabdb69eb1c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7aabdb64526e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7aabdb6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7aabdb6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8fe5)[0x7aabdb6a8fe5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab37c)[0x7aabdb6ab37c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7aabdb6add9e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x597ce5a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x597ce5a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7aabdb645320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7aabdb6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7aabdb6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7aabdb72972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x597ce5a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x597ce5a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7aabdb62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7aabdb62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x597ce5a1aa3a]

Exiting...
01:00:19 (2230): wrapper (7.17.26016): starting
01:00:20 (2230): wrapper (7.17.26016): starting
01:00:20 (2230): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/boinc/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:06:43 (2230): cmdock exited; CPU time 120712.521584
19:06:43 (2230): called boinc_finish(0)

</stderr_txt>
]]>