Task 82041106

Name	corona_RdRp_v2_sidock_01747871_r1_s-20_0
Workunit	53452796
Created	14 Jun 2024, 1:45:28 UTC
Sent	16 Jun 2024, 23:13:08 UTC
Report deadline	22 Jun 2024, 23:13:08 UTC
Received	22 Jun 2024, 14:35:48 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	19472
Run time	2 days 18 hours 4 min 7 sec
CPU time	2 days 18 hours 3 min 19 sec
Validate state	Valid
Credit	1,905.62
Device peak FLOPS	6.21 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.17 MB
Peak swap size	200.08 MB
Peak disk usage	20.60 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
01:13:12 (24415): wrapper (7.17.26016): starting
01:13:12 (24415): wrapper (7.17.26016): starting
01:13:12 (24415): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/sda3/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56352c23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7efdc7c46520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7efdc7c9a9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7efdc7c46476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7efdc7c2c7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89676)[0x7efdc7c8d676]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7efdc7ca4cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7efdc7ca6a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7efdc7ca9453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56352c25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56352c27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7efdc7c46520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7efdc7ce97f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7efdc7cee677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7efdc7d1ff2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56352c251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56352c21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7efdc7c2dd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7efdc7c2de40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56352c21aa3a]

Exiting...
12:41:52 (2081): wrapper (7.17.26016): starting
12:41:53 (2081): wrapper (7.17.26016): starting
12:41:53 (2081): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/sda3/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
double free or corruption (top)
SIGABRT: abort called
02:17:09 (3951): wrapper (7.17.26016): starting
02:17:10 (3951): wrapper (7.17.26016): starting
02:17:10 (3951): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/mnt/sda3/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:35:35 (3951): cmdock exited; CPU time 22239.295074
16:35:35 (3951): called boinc_finish(0)

</stderr_txt>
]]>