Name | corona_RdRp_v2_sidock_01747307_r1_s-20_0 |
Workunit | 53451668 |
Created | 14 Jun 2024, 1:44:21 UTC |
Sent | 16 Jun 2024, 19:19:32 UTC |
Report deadline | 22 Jun 2024, 19:19:32 UTC |
Received | 5 Jul 2024, 10:04:41 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Aborted by user |
Exit status | 203 (0x000000CB) EXIT_ABORTED_VIA_GUI |
Computer ID | 36493 |
Run time | 1 days 9 hours 25 min 50 sec |
CPU time | 1 days 9 hours 23 min 33 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 4.09 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 193.41 MB |
Peak swap size | 200.29 MB |
Peak disk usage | 20.70 MB |
<core_client_version>8.0.2</core_client_version> <![CDATA[ <message> aborted by user</message> <stderr_txt> 21:19:41 (3519): wrapper (7.17.26016): starting 21:19:42 (3519): wrapper (7.17.26016): starting 21:19:42 (3519): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (16 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x561dba03ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f6f9281a580] /lib/x86_64-linux-gnu/libc.so.6(free+0x1a)[0x7f6f92876dda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x561dba05c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x561dba07b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f6f9281a580] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x561dba03aec0] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f6f9281a580] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f6f928adfd5] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x13)[0x7f6f928c0353] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f6f928e8585] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x561dba051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x561dba01e784] /lib/x86_64-linux-gnu/libc.so.6(+0x27c8a)[0x7f6f92804c8a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f6f92804d45] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x561dba01aa3a] Exiting... 06:40:00 (2571): wrapper (7.17.26016): starting 06:40:01 (2571): wrapper (7.17.26016): starting 06:40:01 (2571): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55dcef43ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7fab194ae580] /lib/x86_64-linux-gnu/libc.so.6(free+0x1a)[0x7fab1950adda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55dcef45c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55dcef47b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7fab194ae580] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fab19541fd5] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x13)[0x7fab19554353] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fab1957c585] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55dcef451adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55dcef41e784] /lib/x86_64-linux-gnu/libc.so.6(+0x27c8a)[0x7fab19498c8a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fab19498d45] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55dcef41aa3a] Exiting... 22:55:56 (2687): wrapper (7.17.26016): starting 22:55:57 (2687): wrapper (7.17.26016): starting 22:55:57 (2687): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5652e243ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f0a870a9580] /lib/x86_64-linux-gnu/libc.so.6(free+0x1a)[0x7f0a87105dda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5652e245c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5652e247b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f0a870a9580] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f0a8713cfd5] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x13)[0x7f0a8714f353] /lib/x86_64-linux-gnu/libc.so.6(sleep+0x3a)[0x7f0a8716008a] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5652e2451a9a] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5652e241e784] /lib/x86_64-linux-gnu/libc.so.6(+0x27c8a)[0x7f0a87093c8a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f0a87093d45] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5652e241aa3a] Exiting... 15:19:34 (2591): wrapper (7.17.26016): starting 15:19:34 (2591): wrapper (7.17.26016): starting 15:19:34 (2591): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c35ac3ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f82f5279580] /lib/x86_64-linux-gnu/libc.so.6(free+0x1a)[0x7f82f52d5dda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c35ac5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c35ac7b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f82f5279580] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f82f530cfd5] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x13)[0x7f82f531f353] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f82f5347585] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c35ac51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c35ac1e784] /lib/x86_64-linux-gnu/libc.so.6(+0x27c8a)[0x7f82f5263c8a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f82f5263d45] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c35ac1aa3a] Exiting... 17:37:13 (2569): wrapper (7.17.26016): starting 17:37:13 (2569): wrapper (7.17.26016): starting 17:37:13 (2569): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55bf6623ff8c] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f7ee40f7580] /lib/x86_64-linux-gnu/libc.so.6(free+0x1a)[0x7f7ee4153dda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55bf6625c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55bf6627b8e4] /lib/x86_64-linux-gnu/libc.so.6(+0x3d580)[0x7f7ee40f7580] /lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f7ee418afd5] /lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x13)[0x7f7ee419d353] /lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f7ee41c5585] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55bf66251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55bf6621e784] /lib/x86_64-linux-gnu/libc.so.6(+0x27c8a)[0x7f7ee40e1c8a] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f7ee40e1d45] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55bf6621aa3a] Exiting... 20:38:51 (2525): wrapper (7.17.26016): starting 20:38:52 (2525): wrapper (7.17.26016): starting 20:38:52 (2525): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) </stderr_txt> ]]>
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