Task 82026487

Name	corona_RdRp_v2_sidock_01740573_r1_s-20_0
Workunit	53438200
Created	14 Jun 2024, 1:31:11 UTC
Sent	14 Jun 2024, 9:26:11 UTC
Report deadline	20 Jun 2024, 9:26:11 UTC
Received	2 Jul 2024, 7:25:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54774
Run time	1 days 10 hours 2 min 3 sec
CPU time	1 days 10 hours 2 min 3 sec
Validate state	Valid
Credit	1,329.42
Device peak FLOPS	4.88 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	192.83 MB
Peak swap size	200.84 MB
Peak disk usage	20.56 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:48:35 (598178): wrapper (7.17.26016): starting
09:48:36 (598178): wrapper (7.17.26016): starting
09:48:36 (598178): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x595fd483ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x774adc245320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x774adc2add45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x595fd485c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x595fd487b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x774adc245320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x774adc2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x774adc2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x774adc32972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x595fd4851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd)[0x595fd483cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0x9ca94)[0x774adc29ca94]
/lib/x86_64-linux-gnu/libc.so.6(+0x129c3c)[0x774adc329c3c]

Exiting...
12:18:25 (8919): wrapper (7.17.26016): starting
12:18:25 (8919): wrapper (7.17.26016): starting
12:18:25 (8919): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c72e943ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x78d15b445320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x78d15b4add45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c72e945c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c72e947b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x78d15b445320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78d15b4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78d15b4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78d15b52972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c72e9451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c72e941e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78d15b42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78d15b42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c72e941aa3a]

Exiting...
22:29:27 (2731094): wrapper (7.17.26016): starting
22:29:28 (2731094): wrapper (7.17.26016): starting
22:29:28 (2731094): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:24:59 (2731094): cmdock exited; CPU time 21994.505523
10:24:59 (2731094): called boinc_finish(0)

</stderr_txt>
]]>