Task 81996683

Name	corona_RdRp_v2_sidock_01708588_r2_s-20_1
Workunit	53334231
Created	6 Jun 2024, 11:17:51 UTC
Sent	13 Jun 2024, 11:17:59 UTC
Report deadline	19 Jun 2024, 11:17:59 UTC
Received	29 Jun 2024, 19:28:05 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54022
Run time	4 days 4 hours 51 min 4 sec
CPU time	4 days 0 hours 51 min 48 sec
Validate state	Task was reported too late to validate
Credit	0.00
Device peak FLOPS	4.69 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.88 MB
Peak swap size	200.58 MB
Peak disk usage	20.86 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
20:26:14 (1148601): wrapper (7.17.26016): starting
20:26:14 (1148601): wrapper (7.17.26016): starting
20:26:14 (1148601): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:20:16 (2123): wrapper (7.17.26016): starting
19:20:16 (2123): wrapper (7.17.26016): starting
19:20:16 (2123): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562c58c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fd201c9d520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7fd201d003fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x562c58c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562c58c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fd201c9d520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fd201d407f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fd201d45677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fd201d76d3f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562c58c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562c58c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fd201c84d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fd201c84e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562c58c1aa3a]

Exiting...
19:47:26 (1417): wrapper (7.17.26016): starting
19:47:26 (1417): wrapper (7.17.26016): starting
19:47:26 (1417): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:38:41 (1444): wrapper (7.17.26016): starting
01:38:41 (1444): wrapper (7.17.26016): starting
01:38:41 (1444): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:19:00 (1427): wrapper (7.17.26016): starting
03:19:00 (1427): wrapper (7.17.26016): starting
03:19:00 (1427): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:50:43 (4405): wrapper (7.17.26016): starting
08:50:43 (4405): wrapper (7.17.26016): starting
08:50:43 (4405): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:27:49 (4405): cmdock exited; CPU time 45336.037078
21:27:49 (4405): called boinc_finish(0)

</stderr_txt>
]]>