Task 81985413

Name	corona_RdRp_v2_sidock_01734761_r1_s-20_0
Workunit	53406576
Created	5 Jun 2024, 22:29:07 UTC
Sent	11 Jun 2024, 20:49:49 UTC
Report deadline	17 Jun 2024, 20:49:49 UTC
Received	13 Jun 2024, 16:13:03 UTC
Server state	Over
Outcome	Validate error
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54796
Run time	8 hours 2 min 34 sec
CPU time	8 hours 2 min 34 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	11.54 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.36 MB
Peak swap size	200.85 MB
Peak disk usage	20.49 MB
Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:49:56 (6813): wrapper (7.17.26016): starting
23:49:56 (6813): wrapper (7.17.26016): starting
23:49:56 (6813): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55cd6643ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fdc2bc24050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8ae2c)[0x7fdc2bc72e2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7fdc2bc23fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fdc2bc0e472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f430)[0x7fdc2bc67430]
/lib/x86_64-linux-gnu/libc.so.6(+0x947aa)[0x7fdc2bc7c7aa]
/lib/x86_64-linux-gnu/libc.so.6(+0x96534)[0x7fdc2bc7e534]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7fdc2bc80e8f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55cd6645c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55cd6647b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fdc2bc24050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fdc2bcb7485]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fdc2bcbbd93]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3a)[0x7fdc2bcbbcca]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x55cd66451a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55cd6641e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fdc2bc0f24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fdc2bc0f305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55cd6641aa3a]

Exiting...
19:48:34 (4442): wrapper (7.17.26016): starting
19:48:34 (4442): wrapper (7.17.26016): starting
19:48:34 (4442): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a7b443ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f592c25c050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8ae2c)[0x7f592c2aae2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7f592c25bfb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f592c246472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f430)[0x7f592c29f430]
/lib/x86_64-linux-gnu/libc.so.6(+0x947aa)[0x7f592c2b47aa]
/lib/x86_64-linux-gnu/libc.so.6(+0x96534)[0x7f592c2b6534]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7f592c2b8e8f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a7b445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a7b447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f592c25c050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f592c2ef485]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f592c2f3d93]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f592c31f185]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55a7b4451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a7b441e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f592c24724a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f592c247305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a7b441aa3a]

Exiting...
19:08:45 (4496): wrapper (7.17.26016): starting
19:08:45 (4496): wrapper (7.17.26016): starting
19:08:45 (4496): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56248ea3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fe7a7f19050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8ae2c)[0x7fe7a7f67e2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7fe7a7f18fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fe7a7f03472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f430)[0x7fe7a7f5c430]
/lib/x86_64-linux-gnu/libc.so.6(+0x947aa)[0x7fe7a7f717aa]
/lib/x86_64-linux-gnu/libc.so.6(+0x96534)[0x7fe7a7f73534]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7fe7a7f75e8f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56248ea5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56248ea7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fe7a7f19050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fe7a7fac485]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fe7a7fb0d93]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fe7a7fdc185]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56248ea51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56248ea1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fe7a7f0424a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fe7a7f04305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56248ea1aa3a]

Exiting...
19:12:17 (4369): wrapper (7.17.26016): starting
19:12:17 (4369): wrapper (7.17.26016): starting
19:12:17 (4369): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:12:20 (4369): cmdock exited; CPU time 1.586864
19:12:20 (4369): called boinc_finish(0)

</stderr_txt>
]]>