Task 81985384

Name corona_RdRp_v2_sidock_01734716_r2_s-20_0
Workunit 53406487
Created 5 Jun 2024, 22:29:06 UTC
Sent 11 Jun 2024, 20:11:45 UTC
Report deadline 17 Jun 2024, 20:11:45 UTC
Received 13 Jun 2024, 6:41:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 1 days 7 hours 19 min 56 sec
CPU time 1 days 7 hours 17 min 34 sec
Validate state Valid
Credit 1,327.55
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 193.88 MB
Peak swap size 200.39 MB
Peak disk usage 20.49 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
01:01:39 (14119): wrapper (7.17.26016): starting
01:01:39 (14119): wrapper (7.17.26016): starting
01:01:39 (14119): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a5c1c2df8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7ff60879c3c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7ff6085d903b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7ff6085b8859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7ff60862329e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7ff60862b32c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7ff60862cb5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a5c1c4a3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a5c1c698e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7ff6085d90c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7ff60867326f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ff608678ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7ff6086ab88f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55a5c1c3fadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a5c1c0c784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7ff6085ba0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a5c1c08a3a]

Exiting...
10:32:26 (2500): wrapper (7.17.26016): starting
10:32:26 (2500): wrapper (7.17.26016): starting
10:32:26 (2500): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:41:37 (2500): cmdock exited; CPU time 83230.716151
09:41:37 (2500): called boinc_finish(0)

</stderr_txt>
]]>


©2024 SiDock@home Team