Task 81983124

Name corona_RdRp_v2_sidock_01733602_r2_s-20_0
Workunit 53404259
Created 5 Jun 2024, 22:26:54 UTC
Sent 11 Jun 2024, 9:03:15 UTC
Report deadline 17 Jun 2024, 9:03:15 UTC
Received 13 Jun 2024, 0:37:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 1 days 11 hours 22 min 25 sec
CPU time 1 days 11 hours 19 min 39 sec
Validate state Valid
Credit 1,494.93
Device peak FLOPS 6.67 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 194.66 MB
Peak swap size 201.24 MB
Peak disk usage 20.55 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
14:58:22 (27284): wrapper (7.17.26016): starting
14:58:22 (27284): wrapper (7.17.26016): starting
14:58:22 (27284): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (19 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55f8e472cf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fabc2a183c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fabc285503b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fabc2834859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7fabc289f29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7fabc28a732c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7fabc28a8b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55f8e47493dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55f8e47688e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7fabc28550c0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x55f8e4727ec0]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fabc2a183c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fabc28ef26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fabc28f4ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fabc292788f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55f8e473eadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55f8e470b784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fabc28360b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55f8e4707a3a]

Exiting...
10:32:26 (2498): wrapper (7.17.26016): starting
10:32:26 (2498): wrapper (7.17.26016): starting
10:32:26 (2498): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:37:14 (2498): cmdock exited; CPU time 61397.329507
03:37:14 (2498): called boinc_finish(0)

</stderr_txt>
]]>


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