Name | corona_RdRp_v2_sidock_01731595_r1_s-20_0 |
Workunit | 53400244 |
Created | 5 Jun 2024, 22:22:59 UTC |
Sent | 10 Jun 2024, 13:11:59 UTC |
Report deadline | 16 Jun 2024, 13:11:59 UTC |
Received | 17 Jun 2024, 3:34:29 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Aborted by user |
Exit status | 203 (0x000000CB) EXIT_ABORTED_VIA_GUI |
Computer ID | 58171 |
Run time | 23 hours 56 min 37 sec |
CPU time | 23 hours 47 min 7 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 8.24 GFLOPS |
Application version | CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu |
Peak working set size | 193.87 MB |
Peak swap size | 201.05 MB |
Peak disk usage | 20.50 MB |
<core_client_version>7.24.1</core_client_version> <![CDATA[ <message> aborted by user</message> <stderr_txt> 22:12:22 (25808): wrapper (7.17.26016): starting 22:12:22 (25808): wrapper (7.17.26016): starting 22:12:22 (25808): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f00e5a3ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7ac54691eae0] /usr/lib/libc.so.6(+0x94e44)[0x7ac546976e44] /usr/lib/libc.so.6(gsignal+0x20)[0x7ac54691ea30] /usr/lib/libc.so.6(abort+0xdf)[0x7ac5469064c3] /usr/lib/libc.so.6(+0x25354)[0x7ac546907354] /usr/lib/libc.so.6(+0x9f085)[0x7ac546981085] /usr/lib/libc.so.6(+0xa149c)[0x7ac54698349c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7ac546985dae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f00e5a5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f00e5a7b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7ac54691eae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7ac5469c0f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7ac5469ccd77] /usr/lib/libc.so.6(usleep+0x4a)[0x7ac5469f7bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f00e5a51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f00e5a1e784] /usr/lib/libc.so.6(+0x25c88)[0x7ac546907c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7ac546907d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f00e5a1aa3a] Exiting... 09:49:46 (8815): wrapper (7.17.26016): starting 09:49:46 (8815): wrapper (7.17.26016): starting 09:49:46 (8815): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 15:30:49 (15373): wrapper (7.17.26016): starting 15:30:50 (15373): wrapper (7.17.26016): starting 15:30:50 (15373): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 16:13:07 (8250): wrapper (7.17.26016): starting 16:13:07 (8250): wrapper (7.17.26016): starting 16:13:07 (8250): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 18:40:49 (12263): wrapper (7.17.26016): starting 18:40:49 (12263): wrapper (7.17.26016): starting 18:40:49 (12263): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55ee4223ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f767e25dae0] /usr/lib/libc.so.6(+0x94e44)[0x7f767e2b5e44] /usr/lib/libc.so.6(gsignal+0x20)[0x7f767e25da30] /usr/lib/libc.so.6(abort+0xdf)[0x7f767e2454c3] /usr/lib/libc.so.6(+0x25354)[0x7f767e246354] /usr/lib/libc.so.6(+0x9f085)[0x7f767e2c0085] /usr/lib/libc.so.6(+0xa149c)[0x7f767e2c249c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7f767e2c4dae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55ee4225c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55ee4227b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f767e25dae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f767e2fff43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f767e30bd77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f767e336bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55ee42251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55ee4221e784] /usr/lib/libc.so.6(+0x25c88)[0x7f767e246c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f767e246d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55ee4221aa3a] Exiting... 11:17:31 (9905): wrapper (7.17.26016): starting 11:17:31 (9905): wrapper (7.17.26016): starting 11:17:31 (9905): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 11:57:19 (8770): wrapper (7.17.26016): starting 11:57:19 (8770): wrapper (7.17.26016): starting 11:57:19 (8770): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564c3523ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f6b044f7ae0] /usr/lib/libc.so.6(+0x94e44)[0x7f6b0454fe44] /usr/lib/libc.so.6(gsignal+0x20)[0x7f6b044f7a30] /usr/lib/libc.so.6(abort+0xdf)[0x7f6b044df4c3] /usr/lib/libc.so.6(+0x25354)[0x7f6b044e0354] /usr/lib/libc.so.6(+0x9f085)[0x7f6b0455a085] /usr/lib/libc.so.6(+0xa149c)[0x7f6b0455c49c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7f6b0455edae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564c3525c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564c3527b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f6b044f7ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f6b04599f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f6b045a5d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f6b045d0bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564c35251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564c3521e784] /usr/lib/libc.so.6(+0x25c88)[0x7f6b044e0c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f6b044e0d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564c3521aa3a] Exiting... 17:08:39 (8193): wrapper (7.17.26016): starting 17:08:39 (8193): wrapper (7.17.26016): starting 17:08:39 (8193): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55b3eec3ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f6cb1c9aae0] /usr/lib/libc.so.6(__libc_free+0x25)[0x7f6cb1d01d55] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55b3eec5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55b3eec7b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f6cb1c9aae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f6cb1d3cf43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f6cb1d48d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f6cb1d73bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55b3eec51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55b3eec1e784] /usr/lib/libc.so.6(+0x25c88)[0x7f6cb1c83c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f6cb1c83d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55b3eec1aa3a] Exiting... 10:11:39 (7431): wrapper (7.17.26016): starting 10:11:39 (7431): wrapper (7.17.26016): starting 10:11:39 (7431): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5566d883ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7fe462f3bae0] /usr/lib/libc.so.6(__libc_free+0x25)[0x7fe462fa2d55] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5566d885c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5566d887b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7fe462f3bae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7fe462fddf43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7fe462fe9d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7fe463014bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5566d8851adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5566d881e784] /usr/lib/libc.so.6(+0x25c88)[0x7fe462f24c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7fe462f24d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5566d881aa3a] Exiting... 13:31:44 (13917): wrapper (7.17.26016): starting 13:31:45 (13917): wrapper (7.17.26016): starting 13:31:45 (13917): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55e23a63ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f32fbf30ae0] /usr/lib/libc.so.6(+0x94e44)[0x7f32fbf88e44] /usr/lib/libc.so.6(gsignal+0x20)[0x7f32fbf30a30] /usr/lib/libc.so.6(abort+0xdf)[0x7f32fbf184c3] /usr/lib/libc.so.6(+0x25354)[0x7f32fbf19354] /usr/lib/libc.so.6(+0x9f085)[0x7f32fbf93085] /usr/lib/libc.so.6(+0xa149c)[0x7f32fbf9549c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7f32fbf97dae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55e23a65c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55e23a67b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f32fbf30ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f32fbfd2f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f32fbfded77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f32fc009bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55e23a651adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55e23a61e784] /usr/lib/libc.so.6(+0x25c88)[0x7f32fbf19c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f32fbf19d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55e23a61aa3a] Exiting... 11:22:01 (87349): wrapper (7.17.26016): starting 11:22:01 (87349): wrapper (7.17.26016): starting 11:22:01 (87349): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55750003ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7fcc986c7ae0] /usr/lib/libc.so.6(__libc_free+0x25)[0x7fcc9872ed55] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55750005c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55750007b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7fcc986c7ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7fcc98769f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7fcc98775d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7fcc987a0bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x557500051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55750001e784] /usr/lib/libc.so.6(+0x25c88)[0x7fcc986b0c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7fcc986b0d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55750001aa3a] Exiting... 13:29:22 (7326): wrapper (7.17.26016): starting 13:29:22 (7326): wrapper (7.17.26016): starting 13:29:22 (7326): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55ef1623ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f9e14094ae0] /usr/lib/libc.so.6(__libc_free+0x25)[0x7f9e140fbd55] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55ef1625c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55ef1627b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f9e14094ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f9e14136f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f9e14142d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f9e1416dbda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55ef16251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55ef1621e784] /usr/lib/libc.so.6(+0x25c88)[0x7f9e1407dc88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f9e1407dd4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55ef1621aa3a] Exiting... 18:22:42 (8243): wrapper (7.17.26016): starting 18:22:42 (8243): wrapper (7.17.26016): starting 18:22:42 (8243): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) SIGSEGV: segmentation violation Stack trace (14 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x560b4283ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f8714cbdae0] /usr/lib/libc.so.6(__libc_free+0x25)[0x7f8714d24d55] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x560b4285c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x560b4287b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f8714cbdae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f8714d5ff43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f8714d6bd77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f8714d96bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560b42851adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x560b4281e784] /usr/lib/libc.so.6(+0x25c88)[0x7f8714ca6c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f8714ca6d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x560b4281aa3a] Exiting... 10:38:35 (15917): wrapper (7.17.26016): starting 10:38:35 (15917): wrapper (7.17.26016): starting 10:38:35 (15917): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55e20923ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7fa3587a3ae0] /usr/lib/libc.so.6(+0x94e44)[0x7fa3587fbe44] /usr/lib/libc.so.6(gsignal+0x20)[0x7fa3587a3a30] /usr/lib/libc.so.6(abort+0xdf)[0x7fa35878b4c3] /usr/lib/libc.so.6(+0x25354)[0x7fa35878c354] /usr/lib/libc.so.6(+0x9f085)[0x7fa358806085] /usr/lib/libc.so.6(+0xa149c)[0x7fa35880849c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7fa35880adae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55e20925c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55e20927b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7fa3587a3ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7fa358845f43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7fa358851d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7fa35887cbda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55e209251adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55e20921e784] /usr/lib/libc.so.6(+0x25c88)[0x7fa35878cc88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7fa35878cd4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55e20921aa3a] Exiting... 22:58:24 (1899910): wrapper (7.17.26016): starting 22:58:24 (1899910): wrapper (7.17.26016): starting 22:58:24 (1899910): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5582ade3ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7f9dcbb48ae0] /usr/lib/libc.so.6(+0x94e44)[0x7f9dcbba0e44] /usr/lib/libc.so.6(gsignal+0x20)[0x7f9dcbb48a30] /usr/lib/libc.so.6(abort+0xdf)[0x7f9dcbb304c3] /usr/lib/libc.so.6(+0x25354)[0x7f9dcbb31354] /usr/lib/libc.so.6(+0x9f085)[0x7f9dcbbab085] /usr/lib/libc.so.6(+0xa149c)[0x7f9dcbbad49c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7f9dcbbafdae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5582ade5c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5582ade7b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7f9dcbb48ae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7f9dcbbeaf43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7f9dcbbf6d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7f9dcbc21bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5582ade51adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5582ade1e784] /usr/lib/libc.so.6(+0x25c88)[0x7f9dcbb31c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7f9dcbb31d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5582ade1aa3a] Exiting... 10:45:16 (41040): wrapper (7.17.26016): starting 10:45:16 (41040): wrapper (7.17.26016): starting 10:45:16 (41040): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) free(): invalid pointer SIGABRT: abort called Stack trace (20 frames): ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56420f03ff8c] /usr/lib/libc.so.6(+0x3cae0)[0x7fedabebbae0] /usr/lib/libc.so.6(+0x94e44)[0x7fedabf13e44] /usr/lib/libc.so.6(gsignal+0x20)[0x7fedabebba30] /usr/lib/libc.so.6(abort+0xdf)[0x7fedabea34c3] /usr/lib/libc.so.6(+0x25354)[0x7fedabea4354] /usr/lib/libc.so.6(+0x9f085)[0x7fedabf1e085] /usr/lib/libc.so.6(+0xa149c)[0x7fedabf2049c] /usr/lib/libc.so.6(__libc_free+0x7e)[0x7fedabf22dae] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56420f05c3dd] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56420f07b8e4] /usr/lib/libc.so.6(+0x3cae0)[0x7fedabebbae0] /usr/lib/libc.so.6(clock_nanosleep+0x63)[0x7fedabf5df43] /usr/lib/libc.so.6(nanosleep+0x17)[0x7fedabf69d77] /usr/lib/libc.so.6(usleep+0x4a)[0x7fedabf94bda] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56420f051adf] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56420f01e784] /usr/lib/libc.so.6(+0x25c88)[0x7fedabea4c88] /usr/lib/libc.so.6(__libc_start_main+0x8c)[0x7fedabea4d4c] ../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56420f01aa3a] Exiting... 18:31:07 (7187): wrapper (7.17.26016): starting 18:31:08 (7187): wrapper (7.17.26016): starting 18:31:08 (7187): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) 11:45:15 (872018): wrapper (7.17.26016): starting 11:45:15 (872018): wrapper (7.17.26016): starting 11:45:15 (872018): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out) </stderr_txt> ]]>
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