Task 81969117

Name	corona_RdRp_v2_sidock_01726602_r1_s-20_0
Workunit	53390258
Created	5 Jun 2024, 22:13:08 UTC
Sent	8 Jun 2024, 13:01:32 UTC
Report deadline	14 Jun 2024, 13:01:32 UTC
Received	11 Jun 2024, 9:22:20 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	1 days 16 hours 12 min 18 sec
CPU time	1 days 16 hours 12 min 18 sec
Validate state	Valid
Credit	1,734.12
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.21 MB
Peak swap size	199.79 MB
Peak disk usage	20.64 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
17:51:42 (7725): wrapper (7.17.26016): starting
17:51:42 (7725): wrapper (7.17.26016): starting
17:51:42 (7725): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5622773cdf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7fb5dd5be3c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fb5dd3fb03b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fb5dd3da859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7fb5dd44529e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7fb5dd44d32c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7fb5dd44eb5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5622773ea3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5622774098e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7fb5dd3fb0c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fb5dd49526f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fb5dd49aef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fb5dd4cd88f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5622773dfadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5622773ac784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fb5dd3dc0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5622773a8a3a]

Exiting...
08:17:19 (24724): wrapper (7.17.26016): starting
08:17:19 (24724): wrapper (7.17.26016): starting
08:17:19 (24724): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c74820cf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f4f81f643c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f4f81da103b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f4f81d80859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f4f81deb29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f4f81df332c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f4f81df4b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c7482293dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c7482488e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f4f81da10c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f4f81e3b26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f4f81e40ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f4f81e7388f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c74821eadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c7481eb784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f4f81d820b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c7481e7a3a]

Exiting...
01:28:32 (3827): wrapper (7.17.26016): starting
01:28:33 (3827): wrapper (7.17.26016): starting
01:28:33 (3827): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:22:10 (3827): cmdock exited; CPU time 39162.257249
12:22:10 (3827): called boinc_finish(0)

</stderr_txt>
]]>