Task 81968850

Name	corona_RdRp_v2_sidock_01726475_r1_s-20_0
Workunit	53390004
Created	5 Jun 2024, 22:12:49 UTC
Sent	8 Jun 2024, 11:40:22 UTC
Report deadline	14 Jun 2024, 11:40:22 UTC
Received	11 Jun 2024, 7:00:13 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	1 days 14 hours 15 min 26 sec
CPU time	1 days 14 hours 15 min 26 sec
Validate state	Valid
Credit	1,653.80
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.09 MB
Peak swap size	199.80 MB
Peak disk usage	20.67 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:00 (7508): wrapper (7.17.26016): starting
17:29:00 (7508): wrapper (7.17.26016): starting
17:29:00 (7508): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x563113a09f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f716ded83c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f716dd1503b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f716dcf4859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f716dd5f29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f716dd6732c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f716dd68b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x563113a263dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x563113a458e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f716dd150c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f716ddaf26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f716ddb4ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f716dde788f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563113a1badf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5631139e8784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f716dcf60b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5631139e4a3a]

Exiting...
08:17:19 (24723): wrapper (7.17.26016): starting
08:17:19 (24723): wrapper (7.17.26016): starting
08:17:19 (24723): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562b4cc5cf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f7772c293c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f7772a6603b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f7772a45859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f7772ab029e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f7772ab832c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f7772ab9b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x562b4cc793dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562b4cc988e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f7772a660c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f7772b0026f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f7772b05ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f7772b3888f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562b4cc6eadf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562b4cc3b784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f7772a470b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562b4cc37a3a]

Exiting...
01:28:32 (3826): wrapper (7.17.26016): starting
01:28:33 (3826): wrapper (7.17.26016): starting
01:28:33 (3826): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:00:01 (3826): cmdock exited; CPU time 30651.234588
10:00:01 (3826): called boinc_finish(0)

</stderr_txt>
]]>