Task 81966412

Name	corona_RdRp_v2_sidock_01725261_r2_s-20_0
Workunit	53387577
Created	5 Jun 2024, 22:10:27 UTC
Sent	8 Jun 2024, 1:29:16 UTC
Report deadline	14 Jun 2024, 1:29:16 UTC
Received	11 Jun 2024, 8:18:58 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	4
Run time	2 days 1 hours 58 min 45 sec
CPU time	2 days 1 hours 58 min 45 sec
Validate state	Valid
Credit	2,154.83
Device peak FLOPS	6.67 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	193.12 MB
Peak swap size	199.78 MB
Peak disk usage	20.65 MB

Stderr output

<core_client_version>7.11.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:10 (8375): wrapper (7.17.26016): starting
06:40:10 (8375): wrapper (7.17.26016): starting
06:40:10 (8375): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:04:04 (3520): wrapper (7.17.26016): starting
10:04:04 (3520): wrapper (7.17.26016): starting
10:04:04 (3520): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x563170a97f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f556a7713c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f556a5ae03b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f556a58d859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f556a5f829e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f556a60032c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f556a601b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x563170ab43dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x563170ad38e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f556a5ae0c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f556a64826f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f556a64def7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f556a68088f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563170aa9adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x563170a76784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f556a58f0b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x563170a72a3a]

Exiting...
08:17:19 (24719): wrapper (7.17.26016): starting
08:17:19 (24719): wrapper (7.17.26016): starting
08:17:19 (24719): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564893324f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x143c0)[0x7f7b676243c0]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f7b6746103b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f7b67440859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d29e)[0x7f7b674ab29e]
/lib/x86_64-linux-gnu/libc.so.6(+0x9532c)[0x7f7b674b332c]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b5c)[0x7f7b674b4b5c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5648933413dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5648933608e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x430c0)[0x7f7b674610c0]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f7b674fb26f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f7b67500ef7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f7b6753388f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564893336adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564893303784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f7b674420b3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5648932ffa3a]

Exiting...
01:28:32 (3822): wrapper (7.17.26016): starting
01:28:33 (3822): wrapper (7.17.26016): starting
01:28:33 (3822): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/hoarfrost/Computing/BOINC/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:18:46 (3822): cmdock exited; CPU time 35367.821701
11:18:46 (3822): called boinc_finish(0)

</stderr_txt>
]]>