Task 81965526

Name corona_RdRp_v2_sidock_01724837_r1_s-20_0
Workunit 53386728
Created 5 Jun 2024, 22:09:33 UTC
Sent 7 Jun 2024, 21:57:12 UTC
Report deadline 13 Jun 2024, 21:57:12 UTC
Received 24 Jun 2024, 19:54:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54418
Run time 5 days 11 hours 24 min 37 sec
CPU time 5 days 10 hours 13 min 58 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 5.33 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 192.28 MB
Peak swap size 200.42 MB
Peak disk usage 21.24 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:39:42 (2903649): wrapper (7.17.26016): starting
06:39:42 (2903649): wrapper (7.17.26016): starting
06:39:42 (2903649): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3198454): wrapper (7.17.26016): starting
21:00:00 (3198454): wrapper (7.17.26016): starting
21:00:00 (3198454): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3674910): wrapper (7.17.26016): starting
21:00:00 (3674910): wrapper (7.17.26016): starting
21:00:00 (3674910): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (4144392): wrapper (7.17.26016): starting
21:00:00 (4144392): wrapper (7.17.26016): starting
21:00:00 (4144392): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (859151): wrapper (7.17.26016): starting
21:00:00 (859151): wrapper (7.17.26016): starting
21:00:00 (859151): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:37:45 (1004433): wrapper (7.17.26016): starting
04:37:45 (1004433): wrapper (7.17.26016): starting
04:37:45 (1004433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:53 (1011068): wrapper (7.17.26016): starting
04:52:53 (1011068): wrapper (7.17.26016): starting
04:52:53 (1011068): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:09 (1028841): wrapper (7.17.26016): starting
05:53:09 (1028841): wrapper (7.17.26016): starting
05:53:09 (1028841): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:52 (1052761): wrapper (7.17.26016): starting
06:52:53 (1052761): wrapper (7.17.26016): starting
06:52:53 (1052761): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:01 (1421492): wrapper (7.17.26016): starting
21:00:01 (1421492): wrapper (7.17.26016): starting
21:00:01 (1421492): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:07 (1578379): wrapper (7.17.26016): starting
04:53:07 (1578379): wrapper (7.17.26016): starting
04:53:07 (1578379): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:21 (1596360): wrapper (7.17.26016): starting
05:53:22 (1596360): wrapper (7.17.26016): starting
05:53:22 (1596360): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:21:27 (1626509): wrapper (7.17.26016): starting
07:21:28 (1626509): wrapper (7.17.26016): starting
07:21:28 (1626509): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:01 (2039049): wrapper (7.17.26016): starting
21:00:01 (2039049): wrapper (7.17.26016): starting
21:00:01 (2039049): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:07 (2196327): wrapper (7.17.26016): starting
04:53:07 (2196327): wrapper (7.17.26016): starting
04:53:07 (2196327): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:49 (2214025): wrapper (7.17.26016): starting
05:52:49 (2214025): wrapper (7.17.26016): starting
05:52:49 (2214025): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:49 (2232368): wrapper (7.17.26016): starting
06:52:49 (2232368): wrapper (7.17.26016): starting
06:52:49 (2232368): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2524934): wrapper (7.17.26016): starting
21:00:01 (2524934): wrapper (7.17.26016): starting
21:00:01 (2524934): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:53:02 (2558148): wrapper (7.17.26016): starting
22:53:02 (2558148): wrapper (7.17.26016): starting
22:53:02 (2558148): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:54:10 (2600489): wrapper (7.17.26016): starting
00:54:10 (2600489): wrapper (7.17.26016): starting
00:54:10 (2600489): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:21 (2679153): wrapper (7.17.26016): starting
04:53:21 (2679153): wrapper (7.17.26016): starting
04:53:21 (2679153): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3014476): wrapper (7.17.26016): starting
21:00:00 (3014476): wrapper (7.17.26016): starting
21:00:00 (3014476): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:53:06 (3030800): wrapper (7.17.26016): starting
21:53:06 (3030800): wrapper (7.17.26016): starting
21:53:06 (3030800): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:23 (3170298): wrapper (7.17.26016): starting
04:53:23 (3170298): wrapper (7.17.26016): starting
04:53:23 (3170298): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:21:27 (3182729): wrapper (7.17.26016): starting
05:21:27 (3182729): wrapper (7.17.26016): starting
05:21:27 (3182729): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3509573): wrapper (7.17.26016): starting
21:00:00 (3509573): wrapper (7.17.26016): starting
21:00:00 (3509573): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:20 (3684215): wrapper (7.17.26016): starting
05:53:20 (3684215): wrapper (7.17.26016): starting
05:53:20 (3684215): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3997633): wrapper (7.17.26016): starting
21:00:00 (3997633): wrapper (7.17.26016): starting
21:00:00 (3997633): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:21:27 (4008251): wrapper (7.17.26016): starting
21:21:27 (4008251): wrapper (7.17.26016): starting
21:21:27 (4008251): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:52:46 (4019052): wrapper (7.17.26016): starting
21:52:46 (4019052): wrapper (7.17.26016): starting
21:52:46 (4019052): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:53:29 (4036648): wrapper (7.17.26016): starting
22:53:29 (4036648): wrapper (7.17.26016): starting
22:53:29 (4036648): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:45:01 (4086122): wrapper (7.17.26016): starting
01:45:01 (4086122): wrapper (7.17.26016): starting
01:45:01 (4086122): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:53:28 (4090790): wrapper (7.17.26016): starting
01:53:29 (4090790): wrapper (7.17.26016): starting
01:53:29 (4090790): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:21:41 (4101808): wrapper (7.17.26016): starting
02:21:41 (4101808): wrapper (7.17.26016): starting
02:21:41 (4101808): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:52:51 (4132451): wrapper (7.17.26016): starting
03:52:52 (4132451): wrapper (7.17.26016): starting
03:52:52 (4132451): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:49 (4150003): wrapper (7.17.26016): starting
04:52:49 (4150003): wrapper (7.17.26016): starting
04:52:49 (4150003): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:49 (4167454): wrapper (7.17.26016): starting
05:52:50 (4167454): wrapper (7.17.26016): starting
05:52:50 (4167454): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:48 (4185011): wrapper (7.17.26016): starting
06:52:48 (4185011): wrapper (7.17.26016): starting
06:52:48 (4185011): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:23:13 (5028): wrapper (7.17.26016): starting
07:23:13 (5028): wrapper (7.17.26016): starting
07:23:13 (5028): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (288565): wrapper (7.17.26016): starting
21:00:01 (288565): wrapper (7.17.26016): starting
21:00:01 (288565): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:53:26 (465799): wrapper (7.17.26016): starting
02:53:27 (465799): wrapper (7.17.26016): starting
02:53:27 (465799): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:21:23 (479098): wrapper (7.17.26016): starting
03:21:23 (479098): wrapper (7.17.26016): starting
03:21:23 (479098): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:47 (507642): wrapper (7.17.26016): starting
04:52:47 (507642): wrapper (7.17.26016): starting
04:52:47 (507642): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:48 (525234): wrapper (7.17.26016): starting
05:52:48 (525234): wrapper (7.17.26016): starting
05:52:48 (525234): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (842795): wrapper (7.17.26016): starting
21:00:01 (842795): wrapper (7.17.26016): starting
21:00:01 (842795): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (1386443): wrapper (7.17.26016): starting
21:00:00 (1386443): wrapper (7.17.26016): starting
21:00:00 (1386443): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (1906697): wrapper (7.17.26016): starting
21:00:00 (1906697): wrapper (7.17.26016): starting
21:00:00 (1906697): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:16:45 (1930582): wrapper (7.17.26016): starting
22:16:45 (1930582): wrapper (7.17.26016): starting
22:16:45 (1930582): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:02:39 (1942743): wrapper (7.17.26016): starting
23:02:40 (1942743): wrapper (7.17.26016): starting
23:02:40 (1942743): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:06 (2070576): wrapper (7.17.26016): starting
05:17:06 (2070576): wrapper (7.17.26016): starting
05:17:06 (2070576): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2380017): wrapper (7.17.26016): starting
21:00:00 (2380017): wrapper (7.17.26016): starting
21:00:00 (2380017): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:21 (2540684): wrapper (7.17.26016): starting
05:17:21 (2540684): wrapper (7.17.26016): starting
05:17:21 (2540684): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2857466): wrapper (7.17.26016): starting
21:00:01 (2857466): wrapper (7.17.26016): starting
21:00:01 (2857466): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:17:24 (2864098): wrapper (7.17.26016): starting
21:17:24 (2864098): wrapper (7.17.26016): starting
21:17:24 (2864098): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:06 (3015199): wrapper (7.17.26016): starting
05:17:06 (3015199): wrapper (7.17.26016): starting
05:17:06 (3015199): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3335992): wrapper (7.17.26016): starting
21:00:00 (3335992): wrapper (7.17.26016): starting
21:00:00 (3335992): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:16:49 (3457164): wrapper (7.17.26016): starting
03:16:49 (3457164): wrapper (7.17.26016): starting
03:16:49 (3457164): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/35/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:54:39 (3457164): cmdock exited; CPU time 1770.405825
03:54:39 (3457164): called boinc_finish(0)

</stderr_txt>
]]>


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