Task 81965277

Name corona_RdRp_v2_sidock_01724699_r2_s-20_0
Workunit 53386453
Created 5 Jun 2024, 22:09:19 UTC
Sent 7 Jun 2024, 20:48:55 UTC
Report deadline 13 Jun 2024, 20:48:55 UTC
Received 24 Jun 2024, 16:43:24 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54418
Run time 5 days 10 hours 11 min 15 sec
CPU time 5 days 9 hours 0 min 35 sec
Validate state Task was reported too late to validate
Credit 0.00
Device peak FLOPS 5.33 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 191.98 MB
Peak swap size 200.46 MB
Peak disk usage 21.44 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:49:08 (2873984): wrapper (7.17.26016): starting
04:49:09 (2873984): wrapper (7.17.26016): starting
04:49:09 (2873984): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3198440): wrapper (7.17.26016): starting
21:00:00 (3198440): wrapper (7.17.26016): starting
21:00:00 (3198440): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3674896): wrapper (7.17.26016): starting
21:00:00 (3674896): wrapper (7.17.26016): starting
21:00:00 (3674896): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (4144378): wrapper (7.17.26016): starting
21:00:00 (4144378): wrapper (7.17.26016): starting
21:00:00 (4144378): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (859114): wrapper (7.17.26016): starting
21:00:00 (859114): wrapper (7.17.26016): starting
21:00:00 (859114): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:37:45 (1004419): wrapper (7.17.26016): starting
04:37:45 (1004419): wrapper (7.17.26016): starting
04:37:45 (1004419): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:38 (1011016): wrapper (7.17.26016): starting
04:52:38 (1011016): wrapper (7.17.26016): starting
04:52:38 (1011016): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:09 (1028827): wrapper (7.17.26016): starting
05:53:09 (1028827): wrapper (7.17.26016): starting
05:53:09 (1028827): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:38 (1052703): wrapper (7.17.26016): starting
06:52:38 (1052703): wrapper (7.17.26016): starting
06:52:38 (1052703): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:01 (1421477): wrapper (7.17.26016): starting
21:00:01 (1421477): wrapper (7.17.26016): starting
21:00:01 (1421477): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:07 (1578365): wrapper (7.17.26016): starting
04:53:07 (1578365): wrapper (7.17.26016): starting
04:53:07 (1578365): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:21 (1596345): wrapper (7.17.26016): starting
05:53:22 (1596345): wrapper (7.17.26016): starting
05:53:22 (1596345): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:21:13 (1626384): wrapper (7.17.26016): starting
07:21:13 (1626384): wrapper (7.17.26016): starting
07:21:13 (1626384): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:01 (2039035): wrapper (7.17.26016): starting
21:00:01 (2039035): wrapper (7.17.26016): starting
21:00:01 (2039035): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:07 (2196313): wrapper (7.17.26016): starting
04:53:07 (2196313): wrapper (7.17.26016): starting
04:53:07 (2196313): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:34 (2213980): wrapper (7.17.26016): starting
05:52:35 (2213980): wrapper (7.17.26016): starting
05:52:35 (2213980): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:34 (2232325): wrapper (7.17.26016): starting
06:52:35 (2232325): wrapper (7.17.26016): starting
06:52:35 (2232325): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2524920): wrapper (7.17.26016): starting
21:00:00 (2524920): wrapper (7.17.26016): starting
21:00:00 (2524920): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:53:02 (2558134): wrapper (7.17.26016): starting
22:53:02 (2558134): wrapper (7.17.26016): starting
22:53:02 (2558134): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:54:10 (2600459): wrapper (7.17.26016): starting
00:54:10 (2600459): wrapper (7.17.26016): starting
00:54:10 (2600459): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:21 (2679139): wrapper (7.17.26016): starting
04:53:21 (2679139): wrapper (7.17.26016): starting
04:53:21 (2679139): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3014462): wrapper (7.17.26016): starting
21:00:00 (3014462): wrapper (7.17.26016): starting
21:00:00 (3014462): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:53:06 (3030786): wrapper (7.17.26016): starting
21:53:06 (3030786): wrapper (7.17.26016): starting
21:53:06 (3030786): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:53:23 (3170284): wrapper (7.17.26016): starting
04:53:23 (3170284): wrapper (7.17.26016): starting
04:53:23 (3170284): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:21:13 (3182579): wrapper (7.17.26016): starting
05:21:13 (3182579): wrapper (7.17.26016): starting
05:21:13 (3182579): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3509559): wrapper (7.17.26016): starting
21:00:00 (3509559): wrapper (7.17.26016): starting
21:00:00 (3509559): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:53:20 (3684201): wrapper (7.17.26016): starting
05:53:20 (3684201): wrapper (7.17.26016): starting
05:53:20 (3684201): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3997619): wrapper (7.17.26016): starting
21:00:00 (3997619): wrapper (7.17.26016): starting
21:00:00 (3997619): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:21:12 (4008129): wrapper (7.17.26016): starting
21:21:12 (4008129): wrapper (7.17.26016): starting
21:21:12 (4008129): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:52:31 (4018978): wrapper (7.17.26016): starting
21:52:31 (4018978): wrapper (7.17.26016): starting
21:52:31 (4018978): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:53:29 (4036634): wrapper (7.17.26016): starting
22:53:29 (4036634): wrapper (7.17.26016): starting
22:53:29 (4036634): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:45:01 (4086108): wrapper (7.17.26016): starting
01:45:01 (4086108): wrapper (7.17.26016): starting
01:45:01 (4086108): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:53:28 (4090776): wrapper (7.17.26016): starting
01:53:29 (4090776): wrapper (7.17.26016): starting
01:53:29 (4090776): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:21:26 (4101471): wrapper (7.17.26016): starting
02:21:26 (4101471): wrapper (7.17.26016): starting
02:21:26 (4101471): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:52:37 (4132408): wrapper (7.17.26016): starting
03:52:37 (4132408): wrapper (7.17.26016): starting
03:52:37 (4132408): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:34 (4149960): wrapper (7.17.26016): starting
04:52:35 (4149960): wrapper (7.17.26016): starting
04:52:35 (4149960): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:35 (4167404): wrapper (7.17.26016): starting
05:52:35 (4167404): wrapper (7.17.26016): starting
05:52:35 (4167404): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:52:34 (4184961): wrapper (7.17.26016): starting
06:52:34 (4184961): wrapper (7.17.26016): starting
06:52:34 (4184961): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:23:13 (5014): wrapper (7.17.26016): starting
07:23:13 (5014): wrapper (7.17.26016): starting
07:23:13 (5014): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (288551): wrapper (7.17.26016): starting
21:00:00 (288551): wrapper (7.17.26016): starting
21:00:00 (288551): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:53:26 (465785): wrapper (7.17.26016): starting
02:53:27 (465785): wrapper (7.17.26016): starting
02:53:27 (465785): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:21:08 (478873): wrapper (7.17.26016): starting
03:21:08 (478873): wrapper (7.17.26016): starting
03:21:08 (478873): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:52:45 (507544): wrapper (7.17.26016): starting
04:52:45 (507544): wrapper (7.17.26016): starting
04:52:45 (507544): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:52:32 (525116): wrapper (7.17.26016): starting
05:52:32 (525116): wrapper (7.17.26016): starting
05:52:32 (525116): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (842781): wrapper (7.17.26016): starting
21:00:01 (842781): wrapper (7.17.26016): starting
21:00:01 (842781): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (1386429): wrapper (7.17.26016): starting
21:00:00 (1386429): wrapper (7.17.26016): starting
21:00:00 (1386429): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (1906683): wrapper (7.17.26016): starting
21:00:00 (1906683): wrapper (7.17.26016): starting
21:00:00 (1906683): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:16:31 (1930532): wrapper (7.17.26016): starting
22:16:31 (1930532): wrapper (7.17.26016): starting
22:16:31 (1930532): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:02:39 (1942729): wrapper (7.17.26016): starting
23:02:40 (1942729): wrapper (7.17.26016): starting
23:02:40 (1942729): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:06 (2070562): wrapper (7.17.26016): starting
05:17:06 (2070562): wrapper (7.17.26016): starting
05:17:06 (2070562): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2380003): wrapper (7.17.26016): starting
21:00:00 (2380003): wrapper (7.17.26016): starting
21:00:00 (2380003): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:21 (2540670): wrapper (7.17.26016): starting
05:17:21 (2540670): wrapper (7.17.26016): starting
05:17:21 (2540670): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (2857452): wrapper (7.17.26016): starting
21:00:00 (2857452): wrapper (7.17.26016): starting
21:00:00 (2857452): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:17:24 (2864084): wrapper (7.17.26016): starting
21:17:24 (2864084): wrapper (7.17.26016): starting
21:17:24 (2864084): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:06 (3015188): wrapper (7.17.26016): starting
05:17:06 (3015188): wrapper (7.17.26016): starting
05:17:06 (3015188): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:00 (3335981): wrapper (7.17.26016): starting
21:00:00 (3335981): wrapper (7.17.26016): starting
21:00:00 (3335981): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/43/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:43:10 (3335981): cmdock exited; CPU time 10283.141844
00:43:10 (3335981): called boinc_finish(0)

</stderr_txt>
]]>


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